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NC_042098.1__YP_009621955.1__FDJ23_gp214__00214

Bact-Vir

Identity

Accession:: NC_042098 ↗
Kingdom:: phage

Quality

65.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Agricanvirus› Erwinia_phage_vB_EamM_Desertfox

TaxID: 2060127

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 65-192

PDB

Domain cluster: rep: MW845760.1__QXO10204.1__pEaSNUABM37_00245__00243__D14-138

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4huqS00	1.10.1760.20	Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 ›	0.60	47.0	4.41e-01	84.4%	97.0%
4iu9B02	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.56	43.0	3.76e-01	82.8%	98.0%
4nsmA00	6.10.250.2770	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.54	29.0	3.73e-01	74.2%	93.0%
1gs0A01	1.20.142.10	Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain	0.52	36.0	3.66e-01	70.3%	78.3%
3ibyD02	1.10.287.1770	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.52	32.0	3.71e-01	85.9%	89.3%
1lvlA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.52	39.0	3.33e-01	79.7%	94.0%
3ipiA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.51	45.0	3.61e-01	99.2%	96.3%
4pl3B03	1.20.1440.180	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › KEN domain	0.51	38.0	3.79e-01	86.7%	77.5%
1werA01	1.10.506.10	Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1	0.50	41.0	3.76e-01	89.8%	73.9%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3884585	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.59	41.0	2.95e-01	71.9%	29.9%
5018394	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.57	43.0	3.29e-01	78.1%	79.3%
5008040	101.1.2.951 ↗	alpha arrays › HTH › HTH › winged helix domain › PF29259	0.55	41.0	4.19e-01	77.3%	81.6%
4263317	7014.1.1.1 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA	0.55	40.0	4.10e-01	76.6%	86.4%
3624127	5059.1.1.5 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA	0.53	45.0	3.44e-01	95.3%	82.2%
3997392	106.1.1.1 ↗	alpha arrays › Globin-like › Globin-like › Globin-like › Globin	0.53	37.0	3.33e-01	70.3%	93.9%
3606297	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.52	38.0	3.21e-01	77.3%	100.0%
5046472	604.3.1.0 ↗	alpha bundles › Spectrin repeat-like › BAG domain › BAG domain	0.52	29.0	3.30e-01	78.1%	72.6%
3256828	622.1.1.0 ↗	alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain	0.51	31.0	3.32e-01	83.6%	70.0%
5082442	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.50	32.0	3.26e-01	77.3%	63.1%
3249649	5059.1.1.3 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT	0.50	44.0	3.36e-01	100.0%	93.6%