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NC_042098.1__YP_009622039.1__FDJ23_gp298__00298
Bact-VirNC_042098.1__YP_009622039.1__FDJ23_gp298__00298
Identity
- Accession:
- NC_042098 ↗
- Kingdom:
- phage
Quality
75.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Agricanvirus›
Erwinia_phage_vB_EamM_Desertfox
TaxID: 2060127
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-192
Domain cluster:
rep: NC_042056.1__YP_009616986.1__FDI85_gp215__00060__D33-181
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.89 | 39.0 | 3.97e-01 | 72.2% | 43.7% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.88 | 63.0 | 5.24e-01 | 100.0% | 46.2% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.88 | 39.0 | 4.01e-01 | 81.5% | 44.9% |
| 3pwxA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.86 | 77.0 | 7.14e-01 | 94.0% | 95.1% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 44.0 | 4.01e-01 | 95.4% | 39.6% |
| 5ziyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.85 | 73.0 | 6.66e-01 | 89.4% | 99.0% |
| 1io1A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.85 | 73.0 | 6.99e-01 | 88.1% | 100.0% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.83 | 74.0 | 6.86e-01 | 94.0% | 97.9% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.83 | 53.0 | 6.01e-01 | 88.7% | 82.4% |
| 5mawD00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.83 | 75.0 | 6.13e-01 | 95.4% | 93.8% |
| 3qweA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.82 | 62.0 | 5.04e-01 | 100.0% | 44.6% |
| 2d4xA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.82 | 66.0 | 5.80e-01 | 83.4% | 100.0% |
| 1qu7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.82 | 59.0 | 5.07e-01 | 98.7% | 49.3% |
| 4nx9A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.80 | 64.0 | 6.33e-01 | 81.5% | 100.0% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.80 | 43.0 | 4.78e-01 | 81.5% | 66.4% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 47.0 | 5.26e-01 | 83.4% | 73.8% |
| 3pf0A00 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.79 | 60.0 | 4.56e-01 | 77.5% | 55.7% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.79 | 53.0 | 4.47e-01 | 94.0% | 44.0% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 53.0 | 5.63e-01 | 92.7% | 76.5% |
| 1quuA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 43.0 | 4.71e-01 | 86.1% | 65.1% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 56.0 | 4.53e-01 | 100.0% | 41.3% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.77 | 44.0 | 4.89e-01 | 87.4% | 70.6% |
| 4wpcA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 60.0 | 4.75e-01 | 98.0% | 43.1% |
| 2d1lA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.76 | 52.0 | 4.35e-01 | 93.4% | 42.2% |
| 6h2dS01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.75 | 65.0 | 5.55e-01 | 100.0% | 60.5% |
| 1oahA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.75 | 42.0 | 4.40e-01 | 77.5% | 59.2% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.74 | 44.0 | 5.67e-01 | 80.1% | 98.9% |
| 2d4uB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.74 | 60.0 | 6.00e-01 | 84.8% | 100.0% |
| 3i2wA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 54.0 | 4.40e-01 | 96.7% | 43.4% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 55.0 | 4.54e-01 | 100.0% | 44.3% |
| 2ot4A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.74 | 37.0 | 4.37e-01 | 86.8% | 68.2% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.73 | 55.0 | 4.67e-01 | 100.0% | 49.2% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.72 | 60.0 | 5.47e-01 | 98.0% | 67.2% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.72 | 55.0 | 5.59e-01 | 87.4% | 78.8% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 61.0 | 5.19e-01 | 100.0% | 58.1% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.72 | 49.0 | 5.30e-01 | 70.2% | 80.9% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 59.0 | 4.74e-01 | 100.0% | 47.3% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 55.0 | 4.86e-01 | 98.7% | 57.0% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.71 | 39.0 | 4.39e-01 | 84.1% | 69.2% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.70 | 36.0 | 4.36e-01 | 80.8% | 73.5% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 59.0 | 5.25e-01 | 100.0% | 64.1% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 56.0 | 5.17e-01 | 83.4% | 100.0% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.69 | 52.0 | 4.59e-01 | 78.1% | 69.1% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 59.0 | 4.80e-01 | 100.0% | 51.5% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 64.0 | 5.59e-01 | 98.7% | 90.7% |
| 2bl2A00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.66 | 37.0 | 3.66e-01 | 84.1% | 51.3% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 62.0 | 6.10e-01 | 100.0% | 99.4% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 57.0 | 5.62e-01 | 100.0% | 87.0% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.65 | 61.0 | 4.66e-01 | 98.7% | 68.3% |
| 4e40A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.64 | 60.0 | 5.03e-01 | 99.3% | 65.3% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.64 | 57.0 | 5.55e-01 | 96.0% | 87.0% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 48.0 | 4.64e-01 | 100.0% | 68.2% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.64 | 41.0 | 4.32e-01 | 97.4% | 71.4% |
| 4wjg400 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.64 | 61.0 | 4.93e-01 | 99.3% | 59.4% |
| 3rh3A01 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.64 | 53.0 | 5.60e-01 | 86.8% | 100.0% |
| 4cgkA01 | 6.10.250.3150 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 60.0 | 5.27e-01 | 100.0% | 79.0% |
| 8i3jA01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.63 | 60.0 | 4.92e-01 | 100.0% | 96.8% |
| 3i9wA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 59.0 | 4.72e-01 | 100.0% | 71.5% |
| 1qoyA00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.61 | 55.0 | 4.28e-01 | 96.0% | 48.2% |
| 3g9gA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.60 | 56.0 | 4.67e-01 | 99.3% | 63.2% |
| 3qa8A04 | 1.20.1270.250 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 55.0 | 4.70e-01 | 100.0% | 63.1% |
| 4im0A04 | 1.20.1270.420 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 53.0 | 4.57e-01 | 99.3% | 64.7% |
| 1jqkA03 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 48.0 | 4.53e-01 | 86.1% | 81.7% |
| 2ozbB01 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 44.0 | 4.77e-01 | 92.1% | 100.0% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.53 | 37.0 | 3.63e-01 | 71.5% | 77.1% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 27.0 | 3.27e-01 | 76.8% | 71.8% |
| 1sigA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.52 | 40.0 | 3.19e-01 | 80.1% | 77.4% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 44.0 | 3.86e-01 | 92.1% | 62.6% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3874984 | 192.8.1.248 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th | 0.90 | 52.0 | 3.89e-01 | 100.0% | 26.3% |
| 5012109 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.89 | 61.0 | 5.88e-01 | 100.0% | 62.4% |
| 4426096 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.88 | 53.0 | 5.68e-01 | 93.4% | 69.2% |
| 3289119 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.87 | 61.0 | 4.35e-01 | 98.7% | 27.8% |
| 4935333 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.87 | 63.0 | 6.41e-01 | 100.0% | 74.7% |
| 3385717 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 58.0 | 5.56e-01 | 100.0% | 60.0% |
| 5047670 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.86 | 65.0 | 5.62e-01 | 100.0% | 54.0% |
| 3949412 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 64.0 | 5.93e-01 | 100.0% | 63.2% |
| 5006400 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 62.0 | 5.27e-01 | 100.0% | 49.1% |
| 3477656 | 3755.3.1.123 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Tektin | 0.84 | 56.0 | 5.39e-01 | 100.0% | 60.0% |
| 3816971 | 3755.3.1.285 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › NET2A | 0.83 | 58.0 | 5.56e-01 | 96.0% | 63.5% |
| 3612941 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 61.0 | 6.37e-01 | 100.0% | 82.1% |
| 4392204 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 65.0 | 5.62e-01 | 100.0% | 56.4% |
| 3675423 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 63.0 | 6.17e-01 | 100.0% | 75.0% |
| 5066039 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.82 | 64.0 | 4.28e-01 | 98.7% | 24.7% |
| 3537261 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.81 | 58.0 | 4.63e-01 | 100.0% | 39.3% |
| 4153184 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.80 | 64.0 | 6.01e-01 | 100.0% | 70.0% |
| 3921243 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.79 | 59.0 | 3.76e-01 | 100.0% | 17.2% |
| 3944917 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.79 | 51.0 | 4.39e-01 | 96.7% | 43.1% |
| 3858356 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.79 | 53.0 | 5.47e-01 | 99.3% | 71.0% |
| 5026838 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.79 | 70.0 | 5.86e-01 | 94.0% | 97.6% |
| 5083949 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.78 | 60.0 | 6.43e-01 | 99.3% | 91.5% |
| 3716535 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 56.0 | 4.27e-01 | 99.3% | 34.2% |
| 3447256 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.78 | 51.0 | 4.32e-01 | 97.4% | 41.2% |
| 3598164 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.78 | 62.0 | 6.84e-01 | 96.7% | 100.0% |
| 5007101 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 63.0 | 4.59e-01 | 98.7% | 35.0% |
| 5010596 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 68.0 | 5.82e-01 | 100.0% | 62.3% |
| 4988621 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 67.0 | 5.37e-01 | 100.0% | 50.7% |
| 4556484 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.77 | 45.0 | 4.95e-01 | 95.4% | 70.4% |
| 4535441 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.77 | 62.0 | 5.82e-01 | 100.0% | 70.6% |
| 3408532 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.76 | 58.0 | 5.61e-01 | 100.0% | 70.6% |
| 5039743 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.73 | 64.0 | 6.17e-01 | 100.0% | 83.0% |
| 3498458 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 65.0 | 6.31e-01 | 100.0% | 85.5% |
| 3715891 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 55.0 | 5.37e-01 | 96.7% | 71.5% |
| 3569017 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.72 | 49.0 | 4.86e-01 | 92.7% | 65.0% |
| 4955963 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 67.0 | 5.94e-01 | 100.0% | 72.0% |
| 5006401 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.72 | 64.0 | 6.61e-01 | 100.0% | 96.6% |
| None | — | 0.72 | 51.0 | 4.47e-01 | 94.7% | 48.9% | |
| 3694833 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 48.0 | 5.17e-01 | 98.7% | 78.5% |
| 3973285 | 3755.1.1.28 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › PF25876 | 0.71 | 59.0 | 6.22e-01 | 98.7% | 95.6% |
| 54459 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.71 | 50.0 | 5.18e-01 | 71.5% | 77.0% |
| 3599490 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 58.0 | 5.52e-01 | 100.0% | 73.7% |
| 3968781 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.70 | 57.0 | 5.82e-01 | 96.0% | 86.9% |
| 3182496 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.70 | 67.0 | 4.82e-01 | 100.0% | 75.5% |
| 4019360 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.70 | 59.0 | 5.86e-01 | 100.0% | 85.0% |
| 4030162 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.70 | 65.0 | 3.94e-01 | 100.0% | 17.1% |
| 4974110 | 3755.4.1.91 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › DUF7121 | 0.69 | 66.0 | 5.57e-01 | 100.0% | 64.8% |
| 3743191 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 66.0 | 6.03e-01 | 99.3% | 84.2% |
| 5033885 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 66.0 | 5.84e-01 | 100.0% | 87.3% |
| 3607893 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.69 | 62.0 | 6.31e-01 | 98.7% | 97.9% |
| 4986986 | 3633.1.1.0 ↗ | alpha duplicates or obligate multimers › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor | 0.69 | 61.0 | 5.41e-01 | 98.7% | 68.3% |
| 3875112 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.68 | 65.0 | 4.85e-01 | 100.0% | 44.7% |
| 4305317 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.68 | 65.0 | 4.03e-01 | 99.3% | 21.4% |
| 3763261 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 65.0 | 5.63e-01 | 100.0% | 71.8% |
| 3843224 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.68 | 65.0 | 5.42e-01 | 100.0% | 63.7% |
| 5056869 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 63.0 | 5.97e-01 | 100.0% | 84.0% |
| 3987522 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 57.0 | 5.35e-01 | 93.4% | 73.9% |
| 3779599 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 65.0 | 4.39e-01 | 100.0% | 32.3% |
| 3718629 | 3755.2.1.0 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein | 0.67 | 64.0 | 5.19e-01 | 100.0% | 58.5% |
| 3239816 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 63.0 | 5.70e-01 | 100.0% | 77.0% |
| 4084134 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 63.0 | 6.18e-01 | 99.3% | 98.1% |
| 4940100 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.67 | 62.0 | 6.20e-01 | 98.0% | 95.5% |
| 3398185 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 51.0 | 4.99e-01 | 96.0% | 74.4% |
| 3381118 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 58.0 | 4.83e-01 | 100.0% | 56.0% |
| 3494010 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 62.0 | 5.07e-01 | 100.0% | 57.4% |
| 3737266 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.66 | 63.0 | 4.56e-01 | 100.0% | 82.7% |
| 3711596 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.66 | 58.0 | 5.72e-01 | 100.0% | 88.1% |
| 4193109 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.66 | 63.0 | 3.73e-01 | 100.0% | 43.4% |
| 3240132 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.66 | 62.0 | 5.25e-01 | 100.0% | 66.0% |
| 4994979 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.66 | 63.0 | 5.76e-01 | 100.0% | 95.3% |
| 5044205 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.66 | 62.0 | 4.84e-01 | 100.0% | 81.0% |
| 3235363 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.65 | 62.0 | 5.38e-01 | 100.0% | 71.8% |
| 4097174 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 62.0 | 3.99e-01 | 100.0% | 24.2% |
| 3715936 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 59.0 | 5.60e-01 | 98.7% | 82.3% |
| 4219808 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.65 | 61.0 | 4.51e-01 | 98.7% | 43.4% |
| 3402026 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.65 | 54.0 | 3.75e-01 | 100.0% | 26.6% |
| 4371230 | 2004.1.1.615 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23, AAA_29 | 0.65 | 61.0 | 3.83e-01 | 100.0% | 60.0% |
| 3615972 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 54.0 | 5.03e-01 | 100.0% | 72.4% |
| 3582569 | 3755.3.1.348 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › zf-C4H2 | 0.64 | 60.0 | 5.05e-01 | 100.0% | 84.5% |
| 3640196 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.64 | 59.0 | 4.88e-01 | 100.0% | 57.3% |
| 3574609 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.64 | 55.0 | 5.05e-01 | 89.4% | 100.0% |
| 4061054 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.64 | 62.0 | 5.62e-01 | 100.0% | 92.6% |
| 4116038 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 58.0 | 5.83e-01 | 99.3% | 94.2% |
| 3289134 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.64 | 60.0 | 5.55e-01 | 100.0% | 82.7% |
| 4934439 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.64 | 60.0 | 4.14e-01 | 100.0% | 38.7% |
| 3921802 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 56.0 | 5.48e-01 | 98.7% | 86.7% |
| 3497316 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.64 | 60.0 | 5.87e-01 | 100.0% | 98.1% |
| 4982005 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 59.0 | 4.15e-01 | 100.0% | 37.7% |
| 3964486 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.63 | 54.0 | 5.36e-01 | 94.0% | 85.6% |
| 3870915 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 57.0 | 5.18e-01 | 100.0% | 73.5% |
| 4016287 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 59.0 | 5.57e-01 | 98.7% | 90.3% |
| 4547767 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.61 | 57.0 | 4.15e-01 | 100.0% | 63.2% |
| 5048800 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 55.0 | 5.13e-01 | 99.3% | 94.6% |
| 4998237 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 55.0 | 5.06e-01 | 100.0% | 91.3% |
| 3563649 | 148.1.3.254 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KIF21A_4th | 0.58 | 53.0 | 3.88e-01 | 96.0% | 45.0% |
| 3412759 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.57 | 53.0 | 4.06e-01 | 100.0% | 52.4% |
| 3973283 | 325.1.7.27 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › HH_AprE | 0.56 | 50.0 | 4.54e-01 | 94.0% | 89.7% |
| 4663047 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 43.0 | 3.76e-01 | 86.1% | 58.2% |
D2
medium
residues 193-273_366-457
Domain cluster:
rep: NC_042098.1__YP_009622041.1__FDJ23_gp300__00300__D196-270_338-451
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3edvA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 43.0 | 4.23e-01 | 81.5% | 50.8% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.72 | 41.0 | 3.47e-01 | 82.7% | 35.4% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 44.0 | 3.73e-01 | 98.8% | 39.8% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 35.0 | 4.40e-01 | 85.5% | 77.6% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 42.0 | 3.81e-01 | 98.8% | 44.1% |
| 6xj1A01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 42.0 | 3.72e-01 | 100.0% | 42.9% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.67 | 45.0 | 4.16e-01 | 98.3% | 54.0% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 42.0 | 3.83e-01 | 99.4% | 47.0% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.67 | 33.0 | 4.62e-01 | 78.6% | 96.5% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.67 | 47.0 | 4.87e-01 | 72.3% | 100.0% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 47.0 | 4.78e-01 | 73.4% | 91.9% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.61 | 43.0 | 4.40e-01 | 70.5% | 96.3% |
| 4l6rA02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 47.0 | 3.95e-01 | 81.5% | 59.2% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.58 | 47.0 | 4.59e-01 | 85.5% | 78.8% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.58 | 29.0 | 3.15e-01 | 79.8% | 53.1% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.57 | 49.0 | 3.95e-01 | 91.9% | 90.8% |
| 1xioA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 39.0 | 3.67e-01 | 71.1% | 58.1% |
| 2q00B00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 29.0 | 3.39e-01 | 88.4% | 69.7% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.55 | 41.0 | 4.20e-01 | 76.3% | 78.9% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 46.0 | 3.72e-01 | 99.4% | 48.2% |
| 1bf5A01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.53 | 41.0 | 4.19e-01 | 80.9% | 99.4% |
| 1dlcA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.53 | 40.0 | 3.71e-01 | 83.2% | 60.3% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 33.0 | 3.30e-01 | 86.1% | 58.1% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.52 | 47.0 | 3.88e-01 | 97.7% | 82.7% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 43.0 | 4.08e-01 | 99.4% | 74.1% |
| 1ciyA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.52 | 39.0 | 3.65e-01 | 82.7% | 62.0% |
| 3i9yA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 47.0 | 4.28e-01 | 100.0% | 93.9% |
| 3pf0A00 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.51 | 40.0 | 3.32e-01 | 82.7% | 78.6% |
| 3l39A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 37.0 | 3.56e-01 | 74.0% | 100.0% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.51 | 41.0 | 4.17e-01 | 85.5% | 93.8% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.51 | 39.0 | 4.36e-01 | 80.3% | 100.0% |
| 3wmeA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.51 | 38.0 | 3.21e-01 | 78.6% | 94.0% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.51 | 47.0 | 3.81e-01 | 98.3% | 59.5% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3870151 | 3755.3.1.9 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › SH3BP5 | 0.75 | 45.0 | 5.14e-01 | 97.7% | 79.2% |
| 3502658 | 603.1.1.100 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27017 | 0.73 | 44.0 | 4.78e-01 | 92.5% | 71.0% |
| 3201057 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.70 | 44.0 | 4.30e-01 | 100.0% | 58.4% |
| 3602790 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.69 | 55.0 | 5.21e-01 | 82.7% | 92.7% |
| 3760483 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 42.0 | 4.06e-01 | 100.0% | 55.3% |
| 4034192 | 603.1.1.11 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF3169 | 0.65 | 35.0 | 3.38e-01 | 78.6% | 44.0% |
| 4112797 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 47.0 | 4.52e-01 | 98.3% | 65.1% |
| 4163282 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 47.0 | 4.61e-01 | 98.3% | 68.6% |
| 3832457 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 45.0 | 4.02e-01 | 98.3% | 51.5% |
| 3993135 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 46.0 | 4.45e-01 | 94.2% | 66.2% |
| 3239791 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 40.0 | 4.02e-01 | 100.0% | 61.1% |
| 4573783 | 5086.1.1.91 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PRM1 | 0.63 | 49.0 | 4.12e-01 | 80.9% | 91.2% |
| 3622654 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.62 | 45.0 | 4.25e-01 | 92.5% | 63.0% |
| 3983403 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.62 | 44.0 | 4.36e-01 | 72.3% | 97.3% |
| 3827214 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.62 | 35.0 | 3.82e-01 | 90.8% | 65.5% |
| 3716333 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.62 | 52.0 | 4.83e-01 | 89.6% | 98.6% |
| 3488877 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 52.0 | 4.45e-01 | 90.2% | 80.7% |
| 3257074 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.61 | 41.0 | 3.40e-01 | 96.5% | 40.0% |
| 3733697 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.60 | 47.0 | 3.45e-01 | 80.9% | 57.3% |
| 4969098 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.60 | 44.0 | 4.46e-01 | 98.3% | 75.4% |
| 3309050 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 42.0 | 4.25e-01 | 96.0% | 72.9% |
| 3988781 | 604.6.1.63 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF3169 | 0.59 | 42.0 | 4.67e-01 | 72.3% | 92.6% |
| 3167993 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.59 | 50.0 | 4.66e-01 | 91.9% | 94.1% |
| 3724953 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.58 | 45.0 | 4.70e-01 | 79.2% | 96.1% |
| 3849009 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.58 | 45.0 | 3.85e-01 | 98.3% | 52.7% |
| 4029489 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.58 | 43.0 | 4.65e-01 | 86.1% | 91.0% |
| 3682709 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.58 | 44.0 | 3.89e-01 | 79.2% | 74.5% |
| 3682306 | 633.23.1.32 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom | 0.57 | 43.0 | 4.42e-01 | 78.0% | 100.0% |
| 4017168 | 150.1.1.114 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF30036 | 0.57 | 43.0 | 4.53e-01 | 78.6% | 100.0% |
| 3230188 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 44.0 | 4.70e-01 | 81.5% | 100.0% |
| 3995562 | 602.2.1.0 ↗ | alpha arrays › L-aspartase middle domain-like › RNA-binding protein She2p › RNA-binding protein She2p | 0.55 | 48.0 | 4.29e-01 | 93.6% | 99.2% |
| 3864210 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.55 | 42.0 | 2.92e-01 | 89.6% | 24.5% |
| 3762118 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.55 | 49.0 | 4.99e-01 | 94.8% | 100.0% |
| 3711574 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.54 | 43.0 | 3.92e-01 | 94.8% | 63.0% |
| 3831792 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.53 | 42.0 | 3.71e-01 | 82.7% | 97.3% |
| 3843224 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.53 | 43.0 | 3.84e-01 | 98.3% | 60.8% |
| 3739903 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 41.0 | 4.31e-01 | 84.4% | 88.7% |
| 4211798 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.53 | 47.0 | 4.71e-01 | 94.8% | 100.0% |
| 4984959 | 3758.1.1.113 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Rad50_zn_hook | 0.52 | 46.0 | 3.74e-01 | 98.3% | 50.3% |
| 3573786 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.51 | 47.0 | 4.53e-01 | 99.4% | 88.5% |
| 4956384 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.51 | 41.0 | 3.97e-01 | 100.0% | 74.9% |
| 4032631 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.51 | 38.0 | 3.63e-01 | 77.5% | 69.3% |
| 4935342 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.50 | 38.0 | 3.62e-01 | 78.0% | 70.0% |
D3
medium
residues 274-365