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NC_042101.1__YP_009622381.1__FDJ26_gp56__00056
Bact-VirNC_042101.1__YP_009622381.1__FDJ26_gp56__00056
Identity
- Accession:
- NC_042101 ↗
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Taxonomy
TaxID: 2070197
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-69
Domain cluster:
rep: ON113175.1__UQT01144.1__QOFMPA_00021__00021__D73-126
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r01A02 | 2.20.180.10 | Mainly Beta › Single Sheet › putative fmn-dependent nitroreductase like fold › putative fmn-dependent nitroreductase like domains | 0.68 | 30.0 | 3.71e-01 | 81.8% | 64.3% |
| 4tq1A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 48.0 | 4.13e-01 | 87.9% | 81.7% |
| 2dzjA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 47.0 | 4.29e-01 | 84.8% | 86.4% |
| 3gg6A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 49.0 | 3.86e-01 | 90.9% | 60.4% |
| 2r6fA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 51.0 | 4.97e-01 | 100.0% | 88.9% |
| 1sjyA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.59 | 46.0 | 3.53e-01 | 86.4% | 55.2% |
| 2dyoA03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 46.0 | 4.26e-01 | 87.9% | 96.4% |
| 3vqiD03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 45.0 | 4.35e-01 | 86.4% | 98.7% |
| 1wspA00 | 2.40.240.130 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.56 | 44.0 | 4.13e-01 | 86.4% | 94.0% |
| 4b6wA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 44.0 | 4.05e-01 | 86.4% | 93.0% |
| 2bb6A02 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.56 | 44.0 | 3.82e-01 | 87.9% | 90.6% |
| 5lznA00 | 3.10.20.360 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › CKK domain | 0.56 | 43.0 | 3.72e-01 | 86.4% | 66.7% |
| 5ffiE00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.56 | 42.0 | 3.72e-01 | 83.3% | 99.0% |
| 3i57A01 | 3.10.20.470 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 43.0 | 4.13e-01 | 84.8% | 94.7% |
| 4melA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 43.0 | 3.87e-01 | 86.4% | 85.1% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 43.0 | 3.97e-01 | 86.4% | 96.4% |
| 1v5tA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 41.0 | 3.79e-01 | 84.8% | 81.1% |
| 2dziA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 42.0 | 4.00e-01 | 86.4% | 87.7% |
| 3jyuA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 41.0 | 3.74e-01 | 84.8% | 87.8% |
| 5ip4E00 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.53 | 42.0 | 3.89e-01 | 87.9% | 91.7% |
| 4d2kB00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 41.0 | 3.89e-01 | 86.4% | 87.5% |
| 1qwyA01 | 2.40.50.290 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 36.0 | 3.76e-01 | 78.8% | 77.4% |
| 1b1zA02 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 41.0 | 3.40e-01 | 92.4% | 55.1% |
| 3goeA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 41.0 | 3.91e-01 | 87.9% | 91.3% |
| 2bteA05 | 3.10.20.590 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 39.0 | 4.03e-01 | 84.8% | 96.8% |
| 1n6zA00 | 3.10.20.250 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › YML108W-like | 0.51 | 40.0 | 3.46e-01 | 86.4% | 81.9% |
| 6ixyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.52e-01 | 100.0% | 63.2% |
| 4o1nD01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 44.0 | 3.66e-01 | 97.0% | 91.3% |
| 6kryA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 40.0 | 3.31e-01 | 93.9% | 55.1% |
| 2uwqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 39.0 | 3.64e-01 | 86.4% | 91.9% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 40.0 | 4.05e-01 | 87.9% | 87.7% |
| 2xgjB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 38.0 | 2.73e-01 | 84.8% | 89.4% |
| 1wx8A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 39.0 | 3.54e-01 | 87.9% | 74.0% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027082 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.61 | 49.0 | 4.36e-01 | 87.9% | 92.6% |
| 3527311 | 221.1.1.121 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DCX2_DCDC1 | 0.61 | 47.0 | 4.11e-01 | 86.4% | 75.2% |
| 3895653 | 221.1.1.50 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4430 | 0.61 | 48.0 | 4.21e-01 | 87.9% | 96.1% |
| 3418697 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.61 | 52.0 | 4.65e-01 | 100.0% | 90.8% |
| 3460772 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.60 | 51.0 | 4.24e-01 | 100.0% | 75.2% |
| 4231198 | 221.1.1.24 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblB | 0.60 | 47.0 | 4.17e-01 | 87.9% | 86.0% |
| 4935671 | 221.10.1.0 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain | 0.58 | 47.0 | 4.95e-01 | 87.9% | 98.3% |
| 3700482 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 47.0 | 4.00e-01 | 87.9% | 94.3% |
| 3716890 | 221.3.1.0 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains | 0.58 | 44.0 | 4.48e-01 | 86.4% | 83.1% |
| 3265335 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 44.0 | 3.97e-01 | 86.4% | 83.2% |
| 4937691 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.57 | 44.0 | 3.54e-01 | 86.4% | 55.6% |
| 5047754 | 221.10.1.0 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain | 0.56 | 46.0 | 4.12e-01 | 87.9% | 90.0% |
| 3924460 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 45.0 | 3.90e-01 | 86.4% | 71.0% |
| 3610658 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.56 | 47.0 | 3.67e-01 | 100.0% | 71.9% |
| 3622068 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.55 | 43.0 | 3.92e-01 | 86.4% | 87.8% |
| 3216722 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 44.0 | 3.92e-01 | 87.9% | 86.3% |
| 3265336 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 43.0 | 3.71e-01 | 87.9% | 70.9% |
| 3702708 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 43.0 | 3.86e-01 | 86.4% | 92.6% |
| 3207167 | 221.1.1.183 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26970 | 0.55 | 46.0 | 3.82e-01 | 92.4% | 73.0% |
| 3896089 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.55 | 44.0 | 4.07e-01 | 87.9% | 95.3% |
| 3999476 | 221.1.1.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DIX | 0.54 | 42.0 | 3.74e-01 | 84.8% | 83.2% |
| 3594207 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.54 | 45.0 | 3.62e-01 | 98.5% | 77.9% |
| 3553026 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.54 | 42.0 | 3.77e-01 | 86.4% | 84.2% |
| 3432524 | 221.1.1.111 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiq_DUF_assoc | 0.54 | 46.0 | 3.90e-01 | 98.5% | 80.0% |
| 3579232 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.53 | 42.0 | 3.87e-01 | 87.9% | 83.3% |
| 5045021 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.53 | 41.0 | 4.24e-01 | 86.4% | 91.7% |
| 4162764 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.53 | 45.0 | 4.33e-01 | 93.9% | 86.7% |
| 3852128 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.53 | 44.0 | 4.05e-01 | 92.4% | 74.1% |
| 4026446 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 41.0 | 3.65e-01 | 84.8% | 73.7% |
| 3661788 | 221.1.1.80 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › KHA | 0.53 | 41.0 | 3.90e-01 | 86.4% | 82.3% |
| 3768786 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 42.0 | 3.98e-01 | 87.9% | 95.0% |
| 4228586 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.52 | 40.0 | 4.11e-01 | 86.4% | 93.8% |
| 4951383 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.52 | 40.0 | 3.76e-01 | 87.9% | 67.5% |
| 3373917 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 41.0 | 3.81e-01 | 86.4% | 91.8% |
| 3760738 | 4357.1.1.9 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE, WWE_3 | 0.52 | 33.0 | 2.61e-01 | 71.2% | 27.5% |
| 3585204 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.52 | 42.0 | 3.95e-01 | 92.4% | 77.6% |
| 5015864 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.52 | 43.0 | 3.91e-01 | 89.4% | 94.1% |
| 2390066 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.52 | 40.0 | 3.69e-01 | 86.4% | 81.1% |
| 4286134 | 221.1.1.31 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › NLE | 0.52 | 41.0 | 3.61e-01 | 87.9% | 87.0% |
| 3620089 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 41.0 | 3.46e-01 | 86.4% | 66.4% |
| 3289863 | 243.1.1.63 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6841 | 0.51 | 42.0 | 3.40e-01 | 97.0% | 83.4% |
| 3958806 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.51 | 41.0 | 4.03e-01 | 87.9% | 83.6% |
| 4473508 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.51 | 40.0 | 4.07e-01 | 84.8% | 93.7% |
| 3220041 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 37.0 | 3.35e-01 | 81.8% | 79.0% |
| 5008091 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.51 | 40.0 | 3.94e-01 | 87.9% | 80.0% |
| 4058844 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.51 | 38.0 | 3.83e-01 | 81.8% | 89.2% |
| 4493865 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.51 | 42.0 | 3.80e-01 | 98.5% | 96.0% |
| 3413172 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.51 | 39.0 | 3.65e-01 | 84.8% | 84.5% |
| 1759949 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.51 | 40.0 | 4.08e-01 | 87.9% | 91.0% |
| 4532362 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.50 | 39.0 | 4.01e-01 | 84.8% | 90.8% |
| 3251038 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.50 | 39.0 | 3.54e-01 | 86.4% | 75.8% |
| 3387397 | 225.2.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 | 0.50 | 39.0 | 2.66e-01 | 86.4% | 40.4% |
| 4018064 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.50 | 40.0 | 3.79e-01 | 87.9% | 93.8% |