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NC_042105.1__YP_009622583.1__FDJ30_gp002__00002

Bact-Vir

NC_042105.1__YP_009622583.1__FDJ30_gp002__00002

Identity

Accession:
NC_042105 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-98
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hvcB03 3.30.110.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS 0.61 39.0 4.23e-01 100.0% 79.2%
3owcB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 29.0 2.47e-01 100.0% 30.6%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 30.0 3.02e-01 99.0% 56.4%
4h0nA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 30.0 2.44e-01 99.0% 28.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3416938 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 33.0 3.12e-01 100.0% 44.3%
3783517 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.55 32.0 3.23e-01 100.0% 57.9%
4943581 328.4.1.0 a+b two layers › IF3-like › YhbY-like › YhbY-like 0.53 30.0 3.33e-01 90.7% 68.8%
3678169 304.31.1.0 a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase 0.51 35.0 3.28e-01 100.0% 56.7%