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NC_042109.1__YP_009623091.1__FDJ34_gp53__00053

Bact-Vir

NC_042109.1__YP_009623091.1__FDJ34_gp53__00053

Identity

Accession:
NC_042109 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-66
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gatA00 3.30.50.10 Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A 0.53 34.0 3.28e-01 89.5% 57.6%
2k16A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.51 36.0 3.38e-01 96.5% 57.3%
3d89A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.51 39.0 3.17e-01 91.2% 72.1%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.50 40.0 3.64e-01 100.0% 63.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3721295 10.12.1.12 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.60 40.0 2.57e-01 70.2% 41.3%
4013184 10.12.1.12 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.54 40.0 2.47e-01 82.5% 81.7%
3926975 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 33.0 3.65e-01 77.2% 100.0%