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NC_042114.1__YP_009623590.1__FDJ39_gp08__00008

Bact-Vir

NC_042114.1__YP_009623590.1__FDJ39_gp08__00008

Identity

Accession:
NC_042114 ↗
Kingdom:
phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Madridviridae› Cepunavirus› Streptococcus_phage_CP-7

TaxID: 10748

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-95
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qvrC04 6.10.140.130 Special › Helix non-globular › Helix Hairpins › 0.83 65.0 6.03e-01 81.7% 69.0%
3cazB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.82 73.0 5.47e-01 95.7% 41.9%
4flaC00 6.10.250.2560 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.78 69.0 6.25e-01 98.9% 85.0%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 71.0 5.30e-01 100.0% 70.6%
4ke2A00 6.10.140.1860 Special › Helix non-globular › Helix Hairpins › 0.72 63.0 4.90e-01 95.7% 73.0%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.66 58.0 4.52e-01 100.0% 46.9%
4akgA02 1.20.140.100 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain 0.58 41.0 3.33e-01 73.1% 58.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3609803 4177.1.1.5 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.85 78.0 5.68e-01 100.0% 40.0%
4031283 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.84 78.0 6.51e-01 100.0% 61.3%
5043886 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.82 73.0 5.92e-01 96.8% 68.8%
3782377 4177.1.1.9 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Snx8_BAR_dom 0.80 72.0 5.09e-01 100.0% 34.1%
4417464 3758.1.1.4 ↗ alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › TelA 0.78 74.0 5.19e-01 100.0% 38.0%
3172350 4177.1.1.7 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Pil1 0.75 63.0 4.81e-01 91.4% 42.4%