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NC_042116.1__YP_009623714.1__FDJ41_gp104__00104

Bact-Vir

NC_042116.1__YP_009623714.1__FDJ41_gp104__00104

Identity

Accession:
NC_042116 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-128
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l00A02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 41.0 3.62e-01 84.6% 87.3%
1lp1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.51 21.0 2.99e-01 83.7% 81.8%
2di3B02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.51 32.0 2.99e-01 100.0% 49.0%
1dliA03 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.50 32.0 3.59e-01 86.2% 85.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3668864 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 35.0 3.83e-01 91.1% 80.0%