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NC_042116.1__YP_009624062.1__FDJ41_gp451__00452

Bact-Vir

NC_042116.1__YP_009624062.1__FDJ41_gp451__00452

Identity

Accession:
NC_042116 ↗
Kingdom:
phage

Quality

96.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-104
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 34.0 3.63e-01 72.3% 72.4%
2fd5A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 37.0 3.47e-01 74.3% 90.9%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.46e-01 77.2% 62.1%
3cx5A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 44.0 3.48e-01 100.0% 71.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740014 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 37.0 4.26e-01 100.0% 92.9%
3714843 592.6.1.0 alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain 0.57 36.0 3.66e-01 100.0% 64.0%
3268691 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 40.0 3.06e-01 85.1% 33.5%
5038669 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.53 37.0 3.56e-01 72.3% 67.0%