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NC_042119.1__YP_009624303.1__FDJ44_gp48__00048
Bact-VirNC_042119.1__YP_009624303.1__FDJ44_gp48__00048
Identity
- Accession:
- NC_042119 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Taxonomy
TaxID: 2099444
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-99
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tqnA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 40.0 | 2.57e-01 | 77.3% | 44.0% |
| 1hzfA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 37.0 | 2.61e-01 | 73.2% | 31.1% |
| 3a6mB01 | 3.90.20.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › GrpE nucleotide exchange factor, coiled-coil domain | 0.51 | 43.0 | 4.16e-01 | 93.8% | 86.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3950461 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.71 | 36.0 | 3.64e-01 | 80.4% | 47.0% |
| 4978136 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 54.0 | 3.11e-01 | 96.9% | 10.9% |
| 4136151 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.62 | 36.0 | 3.66e-01 | 89.7% | 56.0% |
| 3632779 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.61 | 42.0 | 3.83e-01 | 71.1% | 76.2% |
| 4972380 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.55 | 49.0 | 3.96e-01 | 96.9% | 76.8% |
| 3971315 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.52 | 36.0 | 3.52e-01 | 80.4% | 65.7% |
| 4579811 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.51 | 35.0 | 3.45e-01 | 78.4% | 65.7% |
| 4289707 | 192.15.1.73 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › GrpE | 0.50 | 45.0 | 4.50e-01 | 96.9% | 94.0% |
| 4054880 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.50 | 36.0 | 3.52e-01 | 80.4% | 68.6% |