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NC_042122.1__YP_009624478.1__FDJ47_gp45__00045

Bact-Vir

NC_042122.1__YP_009624478.1__FDJ47_gp45__00045

Identity

Accession:
NC_042122 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Eclunavirus› Enterobacter_phage_Ec_L1

TaxID: 2070180

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-73
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 51.0 3.20e-01 72.2% 24.9%
3dsoA00 2.40.10.300 Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K 0.67 44.0 4.63e-01 83.3% 75.8%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 44.0 4.39e-01 70.8% 94.7%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 51.0 3.36e-01 88.9% 93.0%
4o2wD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.63 55.0 3.54e-01 100.0% 99.5%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 52.0 3.35e-01 94.4% 43.9%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 54.0 3.55e-01 95.8% 92.8%
5cxbA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 53.0 3.36e-01 94.4% 46.4%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 50.0 3.27e-01 88.9% 35.5%
3da7E00 3.40.20.20 Alpha Beta › 3-Layer(aba) Sandwich › Severin › 0.62 47.0 4.18e-01 81.9% 88.3%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 51.0 3.34e-01 93.1% 34.0%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 49.0 3.22e-01 88.9% 32.3%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.60 44.0 4.29e-01 79.2% 93.7%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 52.0 3.25e-01 100.0% 48.5%
4g56D00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.36e-01 98.6% 85.5%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.27e-01 100.0% 69.3%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 44.0 4.45e-01 84.7% 80.8%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.37e-01 100.0% 84.6%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 3.23e-01 100.0% 73.4%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.57 40.0 3.95e-01 73.6% 68.8%
5mqrA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 47.0 2.99e-01 94.4% 86.4%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.95e-01 94.4% 56.8%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 41.0 3.31e-01 79.2% 91.7%
6m90A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 3.16e-01 100.0% 84.4%
1q1uA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 40.0 3.42e-01 84.7% 100.0%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 39.0 3.60e-01 77.8% 97.9%
4z32A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.67e-01 80.6% 67.7%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 42.0 3.77e-01 100.0% 78.5%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 38.0 3.95e-01 79.2% 95.5%
3b0xA03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 40.0 3.58e-01 87.5% 93.3%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3749898 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 51.0 3.23e-01 83.3% 34.1%
3546218 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 50.0 3.21e-01 83.3% 34.1%
3632850 5.1.4.119 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C 0.65 52.0 3.28e-01 87.5% 35.1%
4059013 5.1.4.481 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR, Sortilin-Vps10 0.65 53.0 2.94e-01 88.9% 9.7%
3415744 5.1.4.420 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Aladin 0.64 55.0 3.45e-01 94.4% 90.1%
3742163 109.4.1.1794 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.64 50.0 3.23e-01 87.5% 28.8%
3938729 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 53.0 3.58e-01 93.1% 47.0%
3506770 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.63 52.0 3.31e-01 90.3% 33.3%
3246924 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.63 49.0 3.54e-01 84.7% 71.4%
3351850 5.1.4.255 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.62 54.0 3.49e-01 100.0% 96.4%
3403536 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 55.0 3.67e-01 100.0% 87.2%
3200199 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.62 52.0 3.02e-01 94.4% 22.7%
3643255 5.1.4.222 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.62 52.0 3.37e-01 94.4% 37.4%
4934826 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 52.0 3.50e-01 94.4% 44.1%
3935989 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 53.0 3.43e-01 98.6% 58.0%
3628522 5.1.4.489 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Prenyltrans 0.62 55.0 3.12e-01 100.0% 23.5%
3998757 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 52.0 3.25e-01 94.4% 44.0%
3804431 5.1.3.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N 0.61 54.0 3.50e-01 98.6% 77.9%
2219 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 54.0 3.52e-01 100.0% 69.6%
3198770 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 53.0 3.57e-01 100.0% 84.0%
4357810 5.1.4.61 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N 0.61 51.0 3.31e-01 94.4% 39.4%
3612239 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 50.0 3.37e-01 95.8% 57.5%
3637442 5.1.4.254 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.60 50.0 3.20e-01 94.4% 38.9%
3719418 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 52.0 3.21e-01 100.0% 48.9%
3573553 535.1.1.1 ↗ alpha arrays › BEACH domain › BEACH domain › BEACH domain › Beach 0.59 50.0 3.08e-01 94.4% 27.4%
3601482 5.1.4.17 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N 0.59 50.0 2.82e-01 94.4% 18.5%
4012957 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 52.0 3.22e-01 100.0% 80.0%
3448016 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.07e-01 94.4% 37.3%
4028075 5.1.4.255 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.59 51.0 3.20e-01 100.0% 96.7%
3769451 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 51.0 3.39e-01 100.0% 57.2%
3680446 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.59 43.0 3.52e-01 77.8% 58.5%
3826594 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.59 52.0 3.49e-01 100.0% 52.4%
3601757 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.05e-01 95.8% 75.8%
3178289 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 52.0 3.31e-01 100.0% 85.3%
4229593 5.1.4.30 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LLGL 0.59 51.0 3.26e-01 100.0% 53.0%
3870492 5.1.4.399 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Hyd_WA 0.59 50.0 3.48e-01 100.0% 79.3%
3592148 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 51.0 3.15e-01 98.6% 76.7%
3517387 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 51.0 3.44e-01 100.0% 88.5%
3251307 5.1.4.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.58 50.0 3.26e-01 98.6% 55.8%
1547989 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 48.0 3.12e-01 93.1% 36.8%
3247804 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 49.0 3.24e-01 100.0% 77.9%
3715045 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.56 41.0 4.15e-01 76.4% 100.0%
5051487 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.54 41.0 3.46e-01 86.1% 94.1%
3776456 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.53 42.0 4.02e-01 84.7% 94.0%
3215596 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 36.0 2.55e-01 70.8% 30.6%
3848155 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.51 38.0 2.82e-01 81.9% 72.4%