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NC_042122.1__YP_009624484.1__FDJ47_gp51__00051

Bact-Vir

NC_042122.1__YP_009624484.1__FDJ47_gp51__00051

Identity

Accession:
NC_042122 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Eclunavirus› Enterobacter_phage_Ec_L1

TaxID: 2070180

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-74
PDB
Domain cluster: rep: OQ357823.1__WDS61370.1__CY1_00037__00037__D2-68
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 51.0 5.85e-01 100.0% 98.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 45.0 5.05e-01 100.0% 92.2%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 48.0 5.23e-01 100.0% 89.5%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 51.0 4.78e-01 100.0% 65.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 51.0 4.95e-01 98.6% 70.9%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 4.29e-01 100.0% 48.7%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 5.11e-01 100.0% 89.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 48.0 5.10e-01 98.6% 94.9%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 51.0 5.19e-01 97.1% 88.2%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 41.0 4.63e-01 98.6% 93.8%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 51.0 5.11e-01 98.6% 88.6%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.63 51.0 4.66e-01 100.0% 66.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 41.0 3.81e-01 98.6% 53.3%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.57 46.0 4.55e-01 100.0% 84.2%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 4.61e-01 100.0% 92.4%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 38.0 4.10e-01 100.0% 94.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 3.97e-01 100.0% 77.3%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.55 44.0 3.23e-01 100.0% 30.0%
3s79A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.54 40.0 2.55e-01 85.7% 68.4%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 4.10e-01 95.7% 95.4%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.51 42.0 3.80e-01 100.0% 67.3%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.51 36.0 2.77e-01 88.6% 28.8%
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.50 38.0 2.77e-01 91.4% 26.2%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.50 39.0 3.03e-01 98.6% 35.6%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3616622 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.55e-01 100.0% 95.2%
3233461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.57e-01 100.0% 98.3%
3781710 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.65 47.0 4.55e-01 95.7% 67.5%
3930014 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.65 47.0 3.65e-01 95.7% 33.8%
3979903 4.1.1.465 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_6, SH3_7 0.65 55.0 3.69e-01 98.6% 24.0%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 4.32e-01 100.0% 61.2%
4078120 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.65 47.0 5.09e-01 95.7% 98.2%
3634475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.54e-01 100.0% 94.3%
3924038 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 5.02e-01 100.0% 84.0%
3294025 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 45.0 4.92e-01 91.4% 100.0%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 5.00e-01 98.6% 98.8%
4032729 4.1.1.168 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2187 0.61 44.0 4.69e-01 98.6% 93.1%
4515863 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 47.0 4.13e-01 100.0% 55.5%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.55e-01 100.0% 75.3%
4398865 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 52.0 4.77e-01 100.0% 86.3%
3504086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 52.0 4.82e-01 100.0% 87.8%
4484974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.70e-01 100.0% 77.6%
4140958 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 46.0 4.60e-01 100.0% 81.3%
3808601 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 53.0 4.97e-01 100.0% 88.2%
3826751 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 46.0 4.42e-01 100.0% 76.2%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 43.0 3.89e-01 100.0% 58.9%
3937006 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 50.0 4.85e-01 100.0% 89.7%
184917 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.57 45.0 4.03e-01 100.0% 60.4%
3890362 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.48e-01 92.9% 87.1%
3332609 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.57 48.0 4.04e-01 97.1% 57.6%
4947695 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 46.0 4.55e-01 100.0% 86.7%
3425872 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.56 48.0 4.50e-01 100.0% 82.2%
4658938 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.56 38.0 3.52e-01 100.0% 55.6%
185736 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.55 44.0 3.17e-01 100.0% 27.8%
5012053 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.55 44.0 4.43e-01 100.0% 87.8%
4020511 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 39.0 3.24e-01 88.6% 39.3%
5029643 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.54 39.0 3.81e-01 97.1% 67.5%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.28e-01 100.0% 82.7%
5072519 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.54 45.0 4.47e-01 100.0% 89.3%
4596087 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 45.0 4.48e-01 100.0% 90.7%
4073433 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 42.0 4.07e-01 100.0% 76.2%
3964889 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.54 39.0 3.85e-01 97.1% 72.0%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 45.0 4.41e-01 100.0% 84.8%
3313139 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 46.0 3.54e-01 100.0% 42.9%
3242299 304.9.1.73 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › TRA-1_regulated 0.53 42.0 3.67e-01 92.9% 84.2%
4340758 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.34e-01 100.0% 91.4%
4947175 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.53 42.0 3.89e-01 100.0% 67.8%
4952498 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.53 42.0 3.79e-01 100.0% 62.6%
1527468 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.53 45.0 3.96e-01 100.0% 64.9%
3707346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.24e-01 98.6% 96.4%
4283343 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.52 43.0 4.13e-01 100.0% 81.2%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.51 44.0 4.24e-01 100.0% 87.5%
3272363 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.51 42.0 3.82e-01 100.0% 67.4%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.51 39.0 3.79e-01 98.6% 73.8%
3700518 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.50 41.0 3.53e-01 98.6% 73.1%
3597361 4.23.1.0 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like 0.50 41.0 3.53e-01 98.6% 73.1%
3586434 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.50 36.0 2.88e-01 88.6% 34.4%