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NC_042137.1__YP_009626206.1__FDJ62_gp21__00021
Bact-VirNC_042137.1__YP_009626206.1__FDJ62_gp21__00021
Identity
- Accession:
- NC_042137 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Taxonomy
TaxID: 1970374
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-133
Domain cluster:
rep: OQ330851.1__WDS38390.1__W2_gp022__00021__D957-1064
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 60.0 | 5.54e-01 | 100.0% | 80.2% |
| 2pnqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 42.0 | 2.88e-01 | 89.2% | 91.6% |
| 2h5fB00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 35.0 | 3.77e-01 | 91.4% | 89.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038875 | 4166.1.1.0 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like | 0.86 | 78.0 | 7.22e-01 | 100.0% | 77.4% |
| 3762105 | 11.1.1.1118 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28312 | 0.54 | 47.0 | 4.11e-01 | 93.5% | 83.0% |
| 3249985 | 11.1.1.813 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › INTS4_C | 0.53 | 44.0 | 3.89e-01 | 90.3% | 94.8% |
| 3222308 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.51 | 42.0 | 3.66e-01 | 89.2% | 91.4% |
| 4225692 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 41.0 | 4.14e-01 | 88.2% | 91.6% |
| 3502307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.52e-01 | 89.2% | 72.0% |
D2
medium
residues 136-207
D3
medium
residues 208-262
Domain cluster:
rep: KX257490.2__ANJ65521.1__X__00014__D37-86