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NC_042139.2__YP_009626561.1__FDK28_gp49__00049

Bact-Vir

NC_042139.2__YP_009626561.1__FDK28_gp49__00049

Identity

Accession:
NC_042139 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-82
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ijqA00 1.10.3450.10 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like 0.51 44.0 3.69e-01 97.6% 84.1%
6imeA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.51 41.0 2.88e-01 87.8% 48.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283617 1022.2.1.0 alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 0.85 64.0 7.11e-01 87.8% 98.5%
3954362 1022.2.1.1 alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib 0.67 55.0 5.04e-01 91.5% 69.1%
3274169 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 44.0 2.75e-01 91.5% 27.6%
D2 medium residues 83-142
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kinA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.51 38.0 2.63e-01 83.3% 48.3%