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NC_042323.1__YP_009637184.1__FGG28_gp044__00044

Bact-Vir

NC_042323.1__YP_009637184.1__FGG28_gp044__00044

Identity

Accession:
NC_042323 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cheoctovirus› Mycobacterium_phage_Mozy

TaxID: 2922213

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-96
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 44.0 4.44e-01 100.0% 67.7%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.65 53.0 4.58e-01 93.9% 94.6%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.61 47.0 3.17e-01 83.3% 32.3%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.61 47.0 3.76e-01 83.3% 72.7%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 47.0 3.57e-01 87.9% 45.0%
1el6A02 2.20.20.20 Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain 0.59 38.0 4.24e-01 100.0% 91.5%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 50.0 3.89e-01 100.0% 61.2%
3su0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 34.0 2.90e-01 100.0% 35.7%
6ui4A02 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 42.0 3.32e-01 87.9% 65.2%
4m4xA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 44.0 3.77e-01 100.0% 88.9%
3hr8A02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.54 36.0 3.55e-01 92.4% 62.7%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.53 44.0 3.23e-01 100.0% 43.3%
4dj3B01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 45.0 3.90e-01 100.0% 89.2%
2bbuA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 42.0 3.24e-01 87.9% 57.7%
1d7bA00 2.60.40.1210 Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain 0.53 39.0 2.83e-01 78.8% 41.1%
2jeuA02 2.170.200.10 Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain 0.53 36.0 3.23e-01 72.7% 89.1%
2gsbA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 42.0 3.89e-01 87.9% 79.8%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.52 37.0 3.21e-01 75.8% 98.1%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 41.0 3.29e-01 100.0% 66.9%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 2.95e-01 100.0% 29.0%
3u9sE04 3.30.700.40 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.50 42.0 3.50e-01 95.5% 76.8%
1vhsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 45.0 3.34e-01 100.0% 46.7%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 43.0 3.42e-01 100.0% 68.7%
4b3xA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 34.0 2.56e-01 71.2% 31.4%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5046787 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.61 38.0 2.54e-01 78.8% 15.8%
3704437 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.60 51.0 4.18e-01 100.0% 89.2%
3484132 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.59 49.0 3.82e-01 100.0% 78.8%
4349207 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.59 47.0 3.71e-01 100.0% 40.3%
4020238 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.58 46.0 3.66e-01 100.0% 40.7%
3966450 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.57 43.0 3.66e-01 83.3% 97.4%
3236961 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 48.0 4.14e-01 100.0% 93.0%
3849012 5.1.4.433 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HPS3_N 0.56 42.0 2.88e-01 81.8% 47.1%
3820883 1.1.1.9 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C 0.56 42.0 2.85e-01 100.0% 22.5%
3961274 3794.1.1.2 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT 0.55 38.0 3.10e-01 71.2% 93.1%
4943531 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 46.0 3.94e-01 100.0% 88.3%
3508588 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 48.0 3.21e-01 100.0% 37.0%
5053192 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 46.0 3.78e-01 100.0% 59.7%
5025492 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 47.0 3.25e-01 98.5% 91.6%
3952469 3794.1.1.2 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT 0.54 47.0 3.80e-01 100.0% 82.3%
1821877 304.114.1.0 ↗ a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.53 44.0 4.05e-01 100.0% 72.5%
3496425 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 39.0 3.16e-01 100.0% 37.3%
3437060 223.1.1.93 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › DUF7950 0.52 44.0 3.62e-01 98.5% 68.0%
3950403 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.52 45.0 3.66e-01 100.0% 81.5%
3505835 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.52 45.0 3.07e-01 100.0% 27.1%
4940665 9.16.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 0.52 43.0 4.01e-01 90.9% 81.7%
4962493 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.51 35.0 3.24e-01 75.8% 89.5%
1124186 3794.1.1.2 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT 0.51 44.0 3.69e-01 100.0% 82.2%
5034643 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.50 41.0 3.71e-01 89.4% 84.3%