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NC_042350.1__YP_009639452.1__FGG64_gp27__00027
Bact-VirNC_042350.1__YP_009639452.1__FGG64_gp27__00027
Identity
- Accession:
- NC_042350 ↗
- Kingdom:
- phage
Quality
71.7
mean pLDDT
Taxonomy
TaxID: 2681615
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-112
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.60 | 44.0 | 3.83e-01 | 77.5% | 92.6% |
| 1ntyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.95e-01 | 73.9% | 78.2% |
| 1vpbA01 | 3.30.2290.10 | Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily | 0.55 | 48.0 | 3.82e-01 | 95.5% | 85.8% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.55 | 30.0 | 3.68e-01 | 85.6% | 90.5% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.53 | 40.0 | 3.87e-01 | 79.3% | 91.9% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.52 | 45.0 | 4.17e-01 | 96.4% | 85.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1678532 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.61 | 37.0 | 4.47e-01 | 84.7% | 95.7% |
| 3263391 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.58 | 39.0 | 3.99e-01 | 91.0% | 69.1% |
| 3268534 | 5.1.5.126 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_VPS8 | 0.56 | 48.0 | 3.39e-01 | 95.5% | 45.3% |
| 3742122 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 40.0 | 3.57e-01 | 74.8% | 72.1% |
| 5025341 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.55 | 45.0 | 4.75e-01 | 95.5% | 98.0% |
| 4993981 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.55 | 37.0 | 4.19e-01 | 91.9% | 96.2% |
| 4054284 | 220.1.1.115 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 | 0.55 | 38.0 | 4.15e-01 | 73.0% | 98.9% |
| 3237754 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 36.0 | 3.89e-01 | 78.4% | 82.2% |
| 3781470 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 39.0 | 3.34e-01 | 76.6% | 57.8% |
| 3744425 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.53 | 46.0 | 3.14e-01 | 97.3% | 37.1% |
| 5011932 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.52 | 40.0 | 4.17e-01 | 95.5% | 87.6% |
| 3836869 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.52 | 42.0 | 4.17e-01 | 87.4% | 93.3% |
| 3410497 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.52 | 45.0 | 3.05e-01 | 96.4% | 43.1% |
| 3819309 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.51 | 36.0 | 4.01e-01 | 78.4% | 95.3% |
| 3342267 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 45.0 | 3.82e-01 | 96.4% | 66.1% |
| 5071146 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.51 | 41.0 | 4.24e-01 | 95.5% | 97.0% |
| 3464481 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.51 | 43.0 | 3.05e-01 | 95.5% | 44.3% |
| 3728206 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.51 | 44.0 | 3.14e-01 | 97.3% | 38.0% |
| 5075859 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.51 | 43.0 | 4.40e-01 | 95.5% | 97.3% |
| 4099346 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.50 | 42.0 | 3.69e-01 | 92.8% | 59.2% |
D2
high
residues 153-214