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NC_042351.1__YP_009639468.1__FGG67_gp02__00002

Bact-Vir

NC_042351.1__YP_009639468.1__FGG67_gp02__00002

Identity

Accession:
NC_042351 ↗
Kingdom:
phage

Quality

73.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kryptosalinivirus› Salinibacter_phage_M8CRM-1

TaxID: 2681612

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-66
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.56e-01 88.5% 77.6%
3osgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 50.0 5.04e-01 77.0% 75.0%
1iufA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 48.0 4.50e-01 73.8% 68.8%
3lsgA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 50.0 5.35e-01 83.6% 100.0%
3w6vA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 58.0 4.77e-01 96.7% 52.3%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.18e-01 90.2% 75.7%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.39e-01 88.5% 98.4%
3mn2A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 56.0 4.78e-01 100.0% 55.6%
1bl0A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 48.0 4.91e-01 85.2% 81.7%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 58.0 4.89e-01 98.4% 93.2%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 37.0 3.62e-01 73.8% 51.5%
1w2yA00 1.10.4010.10 Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase 0.61 43.0 2.99e-01 77.0% 48.2%
2nsaA00 1.10.3120.10 Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain 0.55 38.0 2.84e-01 75.4% 26.9%
5x2bD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 46.0 3.09e-01 100.0% 59.1%
4i5jA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 37.0 2.83e-01 78.7% 47.8%
8eb0A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 40.0 3.67e-01 91.8% 64.0%
3i5gC02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.50 41.0 3.91e-01 91.8% 79.2%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4009811 101.31.1.1 ↗ alpha arrays › HTH › Bacteriophage Sf6 terminase small subunit › Bacteriophage Sf6 terminase small subunit › Sf6_terminase 0.74 64.0 5.33e-01 98.4% 55.2%
4009138 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.74 61.0 6.15e-01 98.4% 95.0%
3969859 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.74 57.0 5.78e-01 90.2% 86.7%
3283554 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.74 55.0 5.90e-01 86.9% 100.0%
3962431 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 57.0 5.34e-01 90.2% 69.3%
4007664 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 60.0 5.82e-01 100.0% 82.9%
3988160 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 58.0 5.90e-01 96.7% 93.3%
2475319 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.73 57.0 5.56e-01 88.5% 77.6%
4009601 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 56.0 5.45e-01 95.1% 75.7%
3979666 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 59.0 5.97e-01 100.0% 96.7%
3982083 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 53.0 5.68e-01 86.9% 100.0%
4007717 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.72 57.0 5.20e-01 90.2% 66.3%
4064919 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 55.0 5.45e-01 90.2% 82.5%
4550738 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 55.0 5.40e-01 90.2% 80.0%
3283005 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 55.0 5.75e-01 91.8% 96.4%
4659840 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 57.0 5.81e-01 98.4% 95.0%
3514805 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 55.0 5.67e-01 91.8% 96.4%
3986770 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 54.0 5.25e-01 90.2% 75.4%
3976640 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 54.0 5.39e-01 95.1% 81.5%
3953111 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 57.0 5.46e-01 90.2% 77.1%
3983051 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 56.0 5.77e-01 96.7% 98.2%
3947206 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 52.0 5.56e-01 86.9% 100.0%
3968945 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 55.0 5.72e-01 93.4% 100.0%
4156023 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 51.0 5.45e-01 83.6% 100.0%
4134806 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 56.0 5.54e-01 100.0% 86.2%
3944775 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 55.0 5.61e-01 93.4% 91.7%
3971593 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 56.0 5.71e-01 98.4% 95.0%
4211867 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 57.0 4.82e-01 96.7% 52.7%
1758881 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.70 52.0 5.12e-01 88.5% 76.1%
4455989 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.69 52.0 5.14e-01 88.5% 78.5%
4034245 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.69 53.0 5.22e-01 90.2% 80.0%
3948459 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.69 52.0 5.13e-01 88.5% 78.5%
3980767 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.69 51.0 5.40e-01 86.9% 100.0%
4007503 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.69 51.0 5.43e-01 85.2% 98.0%
3946284 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.69 53.0 5.39e-01 93.4% 88.3%
3387591 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.69 56.0 5.58e-01 100.0% 89.2%
3971990 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 56.0 5.08e-01 95.1% 65.9%
4004617 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 58.0 4.83e-01 100.0% 53.0%
3962287 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 50.0 5.32e-01 86.9% 100.0%
3278742 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 50.0 5.22e-01 90.2% 92.7%
3947191 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.67 50.0 5.20e-01 86.9% 92.7%
4114758 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.67 53.0 5.29e-01 96.7% 87.5%
3288592 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 52.0 5.17e-01 90.2% 81.5%
4212797 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.66 55.0 5.53e-01 96.7% 98.3%
4363165 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 54.0 5.40e-01 100.0% 92.3%
4368209 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.62 46.0 4.94e-01 83.6% 100.0%
3944622 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.55 40.0 3.71e-01 78.7% 87.5%
3953871 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 41.0 2.73e-01 86.9% 21.1%
3071735 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 40.0 3.89e-01 83.6% 85.1%
D2 medium residues 72-127
PDB
D3 medium residues 128-184
PDB