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NC_042351.1__YP_009639516.1__FGG67_gp50__00050
Bact-VirNC_042351.1__YP_009639516.1__FGG67_gp50__00050
Identity
- Accession:
- NC_042351 ↗
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Taxonomy
TaxID: 2681612
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-143
Domain cluster:
rep: MT006234.1__QIG78055.1__BRUR0010001c01_00024__00024__D3-152
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04404.18 best | ERF | 41.6 | 1.80e-10 | 92.4% | 74.5% |
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.71 | 63.0 | 6.08e-01 | 95.4% | 86.5% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.63 | 46.0 | 4.41e-01 | 100.0% | 65.8% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 46.0 | 4.64e-01 | 76.3% | 75.0% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.62 | 51.0 | 4.35e-01 | 86.3% | 78.8% |
| 3ec9A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 39.0 | 4.01e-01 | 88.5% | 65.1% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 42.0 | 4.19e-01 | 76.3% | 69.1% |
| 3w1eA02 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.59 | 50.0 | 4.54e-01 | 90.8% | 95.5% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 39.0 | 3.94e-01 | 86.3% | 66.2% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 39.0 | 3.97e-01 | 84.0% | 66.7% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.58 | 41.0 | 4.18e-01 | 100.0% | 74.4% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.58 | 48.0 | 4.78e-01 | 88.5% | 92.6% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.58 | 48.0 | 4.93e-01 | 88.5% | 96.0% |
| 2qiyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 4.04e-01 | 88.5% | 70.1% |
| 2bmoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.79e-01 | 78.6% | 68.6% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.95e-01 | 78.6% | 78.4% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 42.0 | 3.89e-01 | 78.6% | 77.1% |
| 1idpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 3.93e-01 | 74.8% | 73.5% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.56 | 45.0 | 4.22e-01 | 87.0% | 76.5% |
| 3hzpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 38.0 | 3.90e-01 | 77.9% | 72.4% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 34.0 | 3.76e-01 | 76.3% | 75.2% |
| 1s5aB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 39.0 | 3.82e-01 | 83.2% | 66.4% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 36.0 | 3.54e-01 | 77.9% | 60.6% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 3.94e-01 | 77.9% | 78.4% |
| 7c5yA02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 40.0 | 3.86e-01 | 84.7% | 66.0% |
| 3robA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.85e-01 | 77.9% | 71.8% |
| 3dm8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.71e-01 | 88.5% | 66.7% |
| 3soyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 39.0 | 3.84e-01 | 74.8% | 69.0% |
| 4x2oA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 4.10e-01 | 90.8% | 67.0% |
| 1jkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 39.0 | 3.88e-01 | 77.9% | 71.2% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 37.0 | 4.13e-01 | 71.0% | 90.5% |
| 3ef8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 40.0 | 3.89e-01 | 78.6% | 70.9% |
| 2kinA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.53 | 37.0 | 3.05e-01 | 72.5% | 67.2% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 32.0 | 3.83e-01 | 73.3% | 90.0% |
| 2gtlO02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 3.61e-01 | 77.1% | 88.3% |
| 3t0qA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 38.0 | 2.88e-01 | 75.6% | 87.5% |
| 2gtlN02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 37.0 | 3.45e-01 | 74.8% | 90.6% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.91e-01 | 73.3% | 86.7% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 3.56e-01 | 77.9% | 70.5% |
| 4h3uA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.91e-01 | 78.6% | 80.8% |
| 2amhA00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.51 | 44.0 | 3.84e-01 | 93.1% | 96.9% |
| 3en2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 33.0 | 3.82e-01 | 74.8% | 93.4% |
| 1vp2A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.50 | 41.0 | 3.68e-01 | 87.8% | 96.3% |
| 4oo0B00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.50 | 41.0 | 3.58e-01 | 88.5% | 95.1% |
| 7f13A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 37.0 | 3.60e-01 | 78.6% | 69.4% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 34.0 | 3.58e-01 | 77.9% | 76.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039841 | 330.1.1.36 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › ERF | 0.91 | 74.0 | 8.05e-01 | 100.0% | 99.1% |
| 3250999 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.79 | 55.0 | 5.70e-01 | 71.8% | 87.2% |
| 4018556 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.72 | 65.0 | 6.03e-01 | 95.4% | 81.2% |
| 3959285 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.67 | 43.0 | 5.18e-01 | 75.6% | 100.0% |
| 3958465 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.66 | 43.0 | 4.10e-01 | 71.0% | 56.7% |
| 1790173 | 243.1.1.39 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TraH_VirB8-like | 0.65 | 42.0 | 4.25e-01 | 73.3% | 65.6% |
| 3291726 | 243.1.1.77 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 | 0.65 | 43.0 | 4.11e-01 | 74.8% | 57.1% |
| 3282685 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.64 | 42.0 | 4.39e-01 | 75.6% | 72.5% |
| 3276225 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 35.0 | 3.81e-01 | 86.3% | 64.5% |
| 3288890 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 40.0 | 4.09e-01 | 73.3% | 64.6% |
| 3281675 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 41.0 | 4.50e-01 | 73.3% | 82.9% |
| 3963115 | 243.1.1.77 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 | 0.62 | 41.0 | 3.98e-01 | 74.8% | 60.0% |
| 3808862 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.61 | 43.0 | 4.26e-01 | 77.9% | 68.1% |
| 3425066 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.61 | 47.0 | 4.22e-01 | 80.2% | 97.8% |
| 3961892 | 243.1.1.77 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 | 0.60 | 43.0 | 4.19e-01 | 74.0% | 67.9% |
| 3290399 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 41.0 | 4.03e-01 | 76.3% | 64.7% |
| 1005533 | 7503.1.1.9 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › FlgT_M | 0.60 | 50.0 | 4.52e-01 | 87.8% | 94.2% |
| 3278986 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 40.0 | 3.83e-01 | 76.3% | 57.4% |
| 3971296 | 243.1.1.5 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 | 0.59 | 39.0 | 3.95e-01 | 77.1% | 66.7% |
| 2701774 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.58 | 44.0 | 4.10e-01 | 78.6% | 77.0% |
| 1918550 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.58 | 48.0 | 4.78e-01 | 88.5% | 92.6% |
| 1684828 | 243.1.1.67 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C | 0.58 | 39.0 | 4.01e-01 | 71.8% | 71.7% |
| 2722108 | 243.1.1.67 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C | 0.55 | 37.0 | 3.82e-01 | 74.0% | 71.0% |
| 5027896 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.55 | 41.0 | 4.27e-01 | 100.0% | 83.2% |
| 4175473 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.55 | 38.0 | 2.88e-01 | 70.2% | 60.0% |
| 4201740 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.54 | 38.0 | 2.81e-01 | 70.2% | 48.6% |
| 3969030 | 7503.1.1.13 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 | 0.54 | 44.0 | 4.05e-01 | 87.0% | 87.6% |
| 3056323 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.54 | 41.0 | 3.86e-01 | 78.6% | 79.1% |
| 3166002 | 7503.1.1.13 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 | 0.53 | 43.0 | 4.03e-01 | 87.0% | 90.9% |
| 4025160 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.53 | 37.0 | 3.80e-01 | 71.0% | 79.2% |
| 3516401 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.53 | 37.0 | 2.72e-01 | 71.8% | 56.5% |
| 3284948 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 33.0 | 3.95e-01 | 86.3% | 97.6% |
| 3915238 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.52 | 36.0 | 2.65e-01 | 71.0% | 56.4% |
| 4123311 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.52 | 36.0 | 2.58e-01 | 70.2% | 55.8% |
| 4927707 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.52 | 38.0 | 3.80e-01 | 77.9% | 75.0% |
| 3372143 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.51 | 39.0 | 4.06e-01 | 80.2% | 91.2% |
| 3892768 | 11.1.1.1054 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26562 | 0.51 | 38.0 | 3.96e-01 | 75.6% | 97.5% |
| 3860882 | 11.1.1.1025 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4556 | 0.51 | 34.0 | 3.75e-01 | 74.0% | 81.8% |
| 3406726 | 5087.3.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C | 0.50 | 36.0 | 2.76e-01 | 73.3% | 83.4% |
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.50 | 35.0 | 3.25e-01 | 71.0% | 90.0% |
| 4979861 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.50 | 33.0 | 3.55e-01 | 70.2% | 76.5% |
| 4989300 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.50 | 34.0 | 3.46e-01 | 70.2% | 71.2% |
D2
high
residues 196-248
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l3nA00 | 1.10.1050.20 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › | 0.74 | 53.0 | 4.27e-01 | 100.0% | 39.4% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.70 | 50.0 | 4.88e-01 | 100.0% | 68.3% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.68 | 49.0 | 4.63e-01 | 100.0% | 62.1% |
| 3b7hA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 55.0 | 5.00e-01 | 94.3% | 73.7% |
| 2ewtA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 55.0 | 5.06e-01 | 94.3% | 80.3% |
| 2bnmA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 54.0 | 4.96e-01 | 94.3% | 77.0% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 53.0 | 4.61e-01 | 94.3% | 61.1% |
| 3zhiA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 52.0 | 4.80e-01 | 96.2% | 90.4% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 52.0 | 4.39e-01 | 94.3% | 70.2% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 51.0 | 4.37e-01 | 94.3% | 60.4% |
| 4cgyA04 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.63 | 52.0 | 3.98e-01 | 94.3% | 87.2% |
| 1cy9A01 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.62 | 52.0 | 4.05e-01 | 94.3% | 86.4% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 49.0 | 4.72e-01 | 92.5% | 84.1% |
| 2w9mA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.62 | 42.0 | 3.90e-01 | 90.6% | 55.9% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 48.0 | 4.63e-01 | 94.3% | 86.2% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 48.0 | 4.32e-01 | 92.5% | 73.2% |
| 3mebA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 51.0 | 4.06e-01 | 100.0% | 69.4% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 48.0 | 4.63e-01 | 94.3% | 83.3% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.60 | 47.0 | 4.24e-01 | 96.2% | 74.1% |
| 1gyzA00 | 1.10.1900.20 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › Ribosomal protein L20, C-terminal domain | 0.60 | 50.0 | 4.92e-01 | 100.0% | 98.3% |
| 2ay1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 49.0 | 3.97e-01 | 100.0% | 67.8% |
| 3mabA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.59 | 42.0 | 3.70e-01 | 94.3% | 49.4% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.58 | 51.0 | 4.97e-01 | 98.1% | 93.1% |
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.55 | 42.0 | 3.87e-01 | 88.7% | 70.7% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 42.0 | 3.94e-01 | 98.1% | 77.9% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 44.0 | 3.94e-01 | 100.0% | 68.2% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.53 | 44.0 | 3.62e-01 | 100.0% | 66.7% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.53 | 42.0 | 3.56e-01 | 94.3% | 75.2% |
| 7kdfB01 | 1.10.418.60 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Nuf2 subunit | 0.53 | 43.0 | 3.25e-01 | 96.2% | 37.7% |
| 3vaaA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 3.19e-01 | 100.0% | 92.6% |
| 6o0aA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 43.0 | 3.22e-01 | 98.1% | 75.8% |
| 1a7eA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.51 | 41.0 | 3.36e-01 | 100.0% | 59.3% |
| 3kd6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 41.0 | 2.65e-01 | 100.0% | 88.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3243704 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.83 | 65.0 | 6.95e-01 | 100.0% | 97.8% |
| 3617913 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.82 | 64.0 | 6.56e-01 | 100.0% | 88.0% |
| 3722053 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 66.0 | 5.67e-01 | 100.0% | 65.9% |
| 4019989 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.68 | 49.0 | 4.72e-01 | 100.0% | 68.3% |
| 3934747 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.67 | 57.0 | 5.27e-01 | 100.0% | 84.3% |
| 3746719 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.66 | 47.0 | 4.69e-01 | 100.0% | 74.5% |
| 5000757 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.66 | 56.0 | 4.38e-01 | 98.1% | 45.8% |
| 3243138 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.64 | 46.0 | 4.52e-01 | 100.0% | 70.0% |
| 3592099 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 49.0 | 4.72e-01 | 96.2% | 73.8% |
| 3693575 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.59 | 48.0 | 4.36e-01 | 100.0% | 68.8% |
| 4046570 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.57 | 48.0 | 4.69e-01 | 100.0% | 88.3% |
| 5004327 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.57 | 42.0 | 3.31e-01 | 79.2% | 76.5% |
| 3866299 | 101.1.1.123 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MCRS_N | 0.54 | 35.0 | 3.43e-01 | 73.6% | 60.0% |
| 4489939 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.53 | 38.0 | 3.71e-01 | 79.2% | 68.3% |
| 3517742 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.53 | 43.0 | 2.92e-01 | 96.2% | 23.6% |
| 4650016 | 3949.1.1.1 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT | 0.53 | 38.0 | 3.65e-01 | 98.1% | 66.2% |
| 4928768 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.52 | 38.0 | 3.19e-01 | 83.0% | 77.1% |
| 3647374 | 164.1.1.20 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › PF28607 | 0.51 | 37.0 | 3.20e-01 | 79.2% | 67.1% |