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NC_042351.1__YP_009639518.1__FGG67_gp52__00052

Bact-Vir

NC_042351.1__YP_009639518.1__FGG67_gp52__00052

Identity

Accession:
NC_042351 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kryptosalinivirus› Salinibacter_phage_M8CRM-1

TaxID: 2681612

Cluster

View cluster (29 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-155
PDB
Domain cluster: rep: NC_020842.1__YP_007673413.1__CGPG_00031__00031__D20-185
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.77 72.0 6.91e-01 98.5% 99.3%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.73 55.0 5.49e-01 93.2% 74.8%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.73 69.0 6.89e-01 100.0% 97.0%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.72 67.0 5.99e-01 100.0% 97.8%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.69 57.0 6.01e-01 100.0% 96.6%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.67 57.0 5.72e-01 88.7% 91.0%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.65 60.0 5.84e-01 100.0% 99.3%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.65 54.0 5.47e-01 88.0% 90.8%
1swgC00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.64 52.0 5.32e-01 84.2% 89.7%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.60 53.0 3.92e-01 96.2% 94.9%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.59 53.0 4.10e-01 98.5% 99.7%
1by5A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.59 42.0 2.76e-01 73.7% 29.4%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.59 43.0 4.62e-01 88.7% 89.4%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.58 42.0 2.77e-01 73.7% 30.7%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.58 51.0 3.86e-01 95.5% 97.1%
1pu4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.58 45.0 3.23e-01 82.7% 94.3%
1t5rB00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.57 42.0 3.42e-01 78.2% 96.7%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.57 44.0 3.21e-01 81.2% 34.7%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.57 52.0 4.72e-01 100.0% 88.3%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 43.0 3.38e-01 81.2% 96.9%
4tw1B00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.56 40.0 3.21e-01 74.4% 92.2%
6i7sG01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.55 49.0 3.98e-01 99.2% 89.8%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.55 46.0 3.30e-01 91.7% 95.5%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 4.46e-01 100.0% 80.3%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 40.0 2.65e-01 75.2% 30.8%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.54 49.0 3.59e-01 100.0% 59.6%
2w16A03 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 39.0 2.59e-01 75.9% 26.3%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 47.0 4.25e-01 100.0% 75.7%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.51 44.0 4.21e-01 94.0% 86.5%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.50 44.0 4.27e-01 95.5% 87.8%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967771 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.88 82.0 8.29e-01 99.2% 98.5%
3945260 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.83 78.0 7.34e-01 100.0% 93.0%
5018057 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.78 60.0 6.29e-01 93.2% 87.0%
4928614 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.78 60.0 6.19e-01 93.2% 83.6%
3837982 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.73 69.0 6.12e-01 100.0% 91.7%
3203571 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.72 56.0 5.56e-01 93.2% 77.9%
4971555 9.13.1.3 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.71 59.0 5.71e-01 86.5% 84.0%
875 9.13.1.3 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.67 57.0 5.72e-01 88.7% 91.0%
3834458 5084.1.1.27 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2921_N 0.65 60.0 5.51e-01 100.0% 86.5%
874 9.13.1.3 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.65 54.0 5.47e-01 88.0% 90.8%
3976237 5084.6.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx 0.64 59.0 4.88e-01 98.5% 100.0%
1716664 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.64 46.0 3.17e-01 73.7% 36.6%
4278291 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.63 59.0 4.40e-01 100.0% 86.6%
3979319 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.63 58.0 4.47e-01 100.0% 88.1%
4480962 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 57.0 4.33e-01 100.0% 86.0%
4150627 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 57.0 4.29e-01 100.0% 87.3%
4234836 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 55.0 4.22e-01 100.0% 84.3%
3978918 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.59 43.0 2.81e-01 74.4% 30.0%
3964572 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.59 54.0 4.17e-01 100.0% 82.6%
3971437 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.59 54.0 4.53e-01 100.0% 99.5%
3247589 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 42.0 4.29e-01 75.2% 93.2%
3387592 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.58 52.0 3.81e-01 97.0% 98.9%
4339003 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 52.0 4.05e-01 100.0% 92.3%
3980865 5084.1.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.58 53.0 4.19e-01 100.0% 93.7%
3937383 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 53.0 4.51e-01 100.0% 96.7%
2392665 5084.1.1.12 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Porin_7 0.56 39.0 4.17e-01 78.9% 80.2%
3386238 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 51.0 3.86e-01 99.2% 90.9%
3969359 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.55 43.0 3.36e-01 82.7% 96.9%
4064323 5084.5.2.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.55 44.0 3.06e-01 83.5% 29.5%
3369679 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.54 49.0 4.36e-01 99.2% 75.3%
3506925 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.54 49.0 4.48e-01 100.0% 92.7%
3646327 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 46.0 4.38e-01 94.7% 95.6%
3385471 4998.1.1.0 ↗ beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain 0.53 43.0 4.20e-01 87.2% 87.6%
2141087 5084.5.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.53 47.0 3.45e-01 97.0% 93.1%
4064251 12.3.1.70 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF26374 0.53 40.0 2.90e-01 80.5% 73.3%
3996943 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.52 44.0 4.30e-01 91.0% 84.1%
5046787 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 43.0 3.54e-01 93.2% 87.9%
4025861 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.51 43.0 4.04e-01 94.0% 80.0%
None — 0.51 46.0 3.50e-01 100.0% 99.4%
None — 0.50 44.0 2.97e-01 94.0% 98.4%