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NC_042351.1__YP_009639520.1__FGG67_gp54__00054

Bact-Vir

NC_042351.1__YP_009639520.1__FGG67_gp54__00054

Identity

Accession:
NC_042351 ↗
Kingdom:
phage

Quality

79.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kryptosalinivirus› Salinibacter_phage_M8CRM-1

TaxID: 2681612

Cluster

View cluster (3 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-175
PDB
Domain cluster: rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00437__D55-187
D2 high residues 182-263
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4akgA06 1.10.8.710 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain 0.76 67.0 6.09e-01 95.1% 79.4%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 62.0 5.84e-01 93.9% 74.7%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 60.0 5.71e-01 93.9% 76.3%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 58.0 5.30e-01 93.9% 67.0%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 63.0 5.35e-01 97.6% 68.2%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.71 60.0 6.13e-01 96.3% 96.3%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 61.0 5.12e-01 97.6% 55.7%
1zp2A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 58.0 5.15e-01 95.1% 63.5%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 62.0 5.12e-01 97.6% 57.3%
4irlB02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.69 49.0 4.72e-01 100.0% 65.6%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 59.0 5.52e-01 96.3% 75.7%
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.69 59.0 4.47e-01 93.9% 39.9%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 55.0 5.27e-01 92.7% 75.5%
1urvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.66 49.0 4.07e-01 80.5% 86.4%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.63 55.0 5.05e-01 100.0% 85.8%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.63 49.0 4.79e-01 98.8% 78.9%
1bqbA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.62 55.0 4.60e-01 100.0% 97.2%
1bcrA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 45.0 3.22e-01 93.9% 24.8%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.62 47.0 5.04e-01 81.7% 98.5%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 46.0 3.78e-01 79.3% 78.7%
4jd9G00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.62 54.0 4.81e-01 98.8% 78.3%
6fhpD00 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.61 43.0 4.76e-01 81.7% 100.0%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 34.0 3.23e-01 97.6% 45.5%
3gl5A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 51.0 3.78e-01 98.8% 53.1%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 37.0 3.68e-01 95.1% 63.1%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.56 45.0 4.43e-01 100.0% 84.1%
1tu9A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 48.0 4.21e-01 100.0% 77.9%
1iuqA01 1.10.1200.50 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal 0.55 42.0 4.41e-01 82.9% 90.8%
1exaA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.55 46.0 3.49e-01 100.0% 72.5%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.54 46.0 3.85e-01 98.8% 91.6%
4ap2B01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.54 47.0 4.00e-01 97.6% 65.7%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.51 35.0 3.54e-01 73.2% 89.4%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.51 42.0 4.19e-01 97.6% 89.2%
1e7pC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.51 42.0 3.05e-01 93.9% 74.4%
5bqnA02 1.20.1120.10 Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" 0.51 36.0 2.40e-01 74.4% 43.5%
3d1uA03 1.20.1270.240 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.51 40.0 3.74e-01 89.0% 69.3%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5076381 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.74 63.0 5.86e-01 95.1% 75.0%
4978149 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.74 63.0 5.98e-01 97.6% 80.0%
4140810 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.74 59.0 5.44e-01 92.7% 67.6%
4982983 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 61.0 5.85e-01 95.1% 78.9%
4999627 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 61.0 5.17e-01 95.1% 55.6%
4970309 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 61.0 5.82e-01 95.1% 78.9%
4947167 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 61.0 4.98e-01 95.1% 50.0%
5023607 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 61.0 5.04e-01 95.1% 51.7%
3740436 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.72 57.0 4.99e-01 86.6% 57.5%
4999997 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.72 59.0 5.66e-01 92.7% 76.8%
3890040 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.72 60.0 5.03e-01 95.1% 53.6%
3352321 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.72 59.0 5.38e-01 96.3% 67.3%
3443564 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.72 62.0 4.95e-01 97.6% 48.8%
4943136 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.71 57.0 5.51e-01 89.0% 77.8%
5053418 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 58.0 5.69e-01 96.3% 81.1%
5042605 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 57.0 5.48e-01 93.9% 76.3%
3345767 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.71 62.0 5.41e-01 97.6% 67.2%
4945282 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.71 58.0 5.19e-01 95.1% 64.0%
4994316 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 59.0 4.95e-01 95.1% 53.6%
1879330 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 57.0 5.50e-01 93.9% 78.0%
3255346 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.71 63.0 5.42e-01 98.8% 63.8%
1276702 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.71 58.0 5.45e-01 93.9% 74.2%
169082 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.70 61.0 4.46e-01 97.6% 37.1%
5061156 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 60.0 5.30e-01 93.9% 67.5%
4944102 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.70 56.0 5.47e-01 93.9% 78.9%
3833444 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.70 58.0 5.11e-01 90.2% 62.5%
3737247 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.70 62.0 4.52e-01 97.6% 36.8%
3476361 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.70 61.0 5.40e-01 97.6% 66.7%
4947863 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.70 56.0 5.42e-01 93.9% 78.9%
5064398 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 59.0 5.53e-01 93.9% 76.0%
4955899 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.69 54.0 4.93e-01 95.1% 62.7%
3407936 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.69 62.0 5.41e-01 100.0% 65.6%
4453525 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.69 49.0 5.47e-01 74.4% 98.5%
4969272 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 60.0 5.32e-01 97.6% 68.3%
4962267 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 56.0 5.45e-01 96.3% 81.1%
4956629 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 55.0 5.00e-01 95.1% 65.5%
4000036 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.68 60.0 5.07e-01 98.8% 61.5%
4030134 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 57.0 4.84e-01 93.9% 56.3%
4927466 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 54.0 5.25e-01 87.8% 78.9%
3535287 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.67 54.0 5.59e-01 95.1% 96.0%
3646235 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.65 52.0 5.17e-01 89.0% 83.5%
3648390 103.2.1.3 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › PF28345 0.62 55.0 5.34e-01 100.0% 97.8%
3941077 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.60 44.0 3.79e-01 80.5% 87.1%
3960471 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.58 45.0 4.72e-01 89.0% 95.9%
3785011 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.58 50.0 4.54e-01 100.0% 76.5%
3663702 143.1.1.5 ↗ alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain › VIN3_C 0.58 40.0 4.22e-01 72.0% 92.9%
3163820 101.1.2.185 ↗ alpha arrays › HTH › HTH › winged helix domain › RecD_N 0.57 50.0 4.38e-01 98.8% 70.4%
3651135 3788.1.1.20 ↗ alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › VIN3_C 0.57 40.0 4.15e-01 73.2% 94.7%
4624818 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.56 41.0 4.04e-01 78.0% 83.3%
3694039 3985.1.1.0 ↗ alpha bundles › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) 0.55 44.0 4.31e-01 89.0% 93.3%
3684672 621.1.1.3 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB 0.55 41.0 3.84e-01 78.0% 76.0%
1407186 3832.1.1.1 ↗ alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 0.54 46.0 3.63e-01 98.8% 76.9%
4610814 185.1.1.1 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl 0.52 37.0 3.34e-01 74.4% 89.6%
4372227 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.52 38.0 3.33e-01 78.0% 60.0%