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NC_043027.1__YP_009664251.1__FK780_gp049__00049

Bact-Vir

Identity

Accession:: NC_043027 ↗
Kingdom:: phage

Quality

68.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Takahashivirus› Bacillus_phage_PBS1

TaxID: 2884423

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-30_65-186

PDB

Domain cluster: rep: KT852578.1__ALJ98014.1__BMBtp1_22__00022__D5-71_86-155

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5fgoA00	3.10.450.700	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.73	32.0	4.77e-01	71.3%	98.4%
1krlA00	6.20.50.130	Special › Other non-globular › N-terminal domain of TfIIb ›	0.71	22.0	3.96e-01	89.3%	90.9%
4aghA00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.69	35.0	4.71e-01	89.3%	92.5%
3k44B00	3.30.2450.30	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold ›	0.68	59.0	6.06e-01	96.7%	99.3%
4n6tA00	3.10.450.10	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.66	26.0	3.51e-01	95.3%	67.1%
7vd7A01	3.10.450.530	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system	0.62	27.0	3.44e-01	96.7%	66.3%
1tu1A00	3.40.1000.10	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich	0.61	33.0	3.37e-01	82.0%	52.8%
1whqA01	3.30.160.20	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.56	24.0	3.30e-01	80.0%	78.9%
7oufB01	3.30.420.10	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H	0.56	29.0	2.91e-01	85.3%	46.3%
4ntqB00	3.30.2450.20	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold ›	0.54	45.0	4.58e-01	88.0%	100.0%
2qkdA03	2.20.25.420	Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain	0.52	20.0	3.05e-01	70.7%	92.2%
3ge2A00	2.40.128.50	Mainly Beta › Beta Barrel › Lipocalin ›	0.52	29.0	3.58e-01	88.7%	89.9%
2vbuA01	2.40.30.30	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like	0.51	35.0	3.72e-01	80.7%	80.0%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3672898	295.1.1.3 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA	0.71	56.0	6.12e-01	91.3%	100.0%
3483806	295.1.1.3 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA	0.67	59.0	5.96e-01	96.0%	100.0%
3934170	241.4.1.1 ↗	a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom	0.61	28.0	3.47e-01	80.0%	67.4%
3403936	241.4.1.1 ↗	a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom	0.56	29.0	3.42e-01	80.0%	70.5%
3987123	881.1.1.0 ↗	a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like	0.56	30.0	3.71e-01	83.3%	84.4%
3784777	220.1.1.32 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind	0.55	44.0	4.27e-01	99.3%	75.8%
3183753	59.1.1.9 ↗	beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › EAF	0.55	27.0	2.92e-01	92.7%	53.6%
3164017	9.11.1.0 ↗	beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like	0.52	32.0	3.82e-01	86.0%	97.8%
3610047	227.1.1.11 ↗	a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1	0.51	36.0	3.56e-01	72.7%	88.1%
3243400	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.50	44.0	3.90e-01	95.3%	76.7%