NC_043027.1__YP_009664297.1__FK780_gp095__00095

Bact-Vir

Identity

40.2 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Takahashivirus› Bacillus_phage_PBS1

TaxID: 2884423

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 418-553

PDB

D2 high residues 1280-1339

PDB

D3 medium residues 55-104

PDB

D4 medium residues 1434-1446_1458-1476_1547-1670

PDB

Domain cluster: rep: Salt_Pond_R2_restored_H2O_MG_scaffold_2_prodigal-single.1__X__X__00421__D424-458_536-653

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21277.3 best	T6SS_VgrG3-like_C	74.7	1.10e-20	82.0%	59.0%

D5 medium residues 1477-1546

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF21277.3 best	T6SS_VgrG3-like_C	34.7	2.20e-08	100.0%	32.2%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1chkA02	3.30.386.10	Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2	0.80	73.0	6.58e-01	100.0%	85.3%
1qgiA01	3.30.386.10	Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2	0.74	66.0	5.17e-01	100.0%	68.0%
1rsoB00	1.10.287.650	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain	0.60	37.0	4.01e-01	70.0%	76.8%
1lqsL01	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.58	43.0	3.88e-01	81.4%	56.0%
1szqA01	1.10.4100.10	Mainly Alpha › Orthogonal Bundle › 2-methylcitrate dehydratase PrpD › 2-methylcitrate dehydratase PrpD	0.55	42.0	2.81e-01	87.1%	94.6%
2rp4A00	6.10.280.60	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain	0.55	40.0	4.03e-01	81.4%	78.9%
5kd5A01	1.10.390.30	Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3	0.54	43.0	3.21e-01	87.1%	66.5%
2kp7A01	1.10.150.110	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like	0.53	37.0	3.73e-01	75.7%	81.1%
5uiyA00	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.52	38.0	3.36e-01	78.6%	71.0%
1j5yA02	3.30.1340.20	Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain	0.50	36.0	3.21e-01	98.6%	50.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1284710	235.1.1.25 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › T6SS_VgrG3-like_C	0.87	76.0	5.29e-01	100.0%	32.5%
1125597	235.1.1.8 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_46	0.80	73.0	4.87e-01	100.0%	34.0%
3705456	320.4.1.3 ↗	a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB	0.59	43.0	3.61e-01	77.1%	85.8%
3940261	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.59	37.0	3.75e-01	80.0%	64.3%
3838879	235.1.1.9 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT	0.57	43.0	3.47e-01	84.3%	62.4%
3743175	630.1.1.0 ↗	a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain	0.55	41.0	3.12e-01	81.4%	72.4%
5058385	131.1.1.3 ↗	alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD	0.53	41.0	3.15e-01	88.6%	92.4%
5046448	181.1.1.0 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins	0.51	36.0	3.87e-01	77.1%	98.3%