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NC_043027.1__YP_009664350.1__FK780_gp298__00148
Bact-VirNC_043027.1__YP_009664350.1__FK780_gp298__00148
Identity
- Accession:
- NC_043027 ↗
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Taxonomy
TaxID: 2884423
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-159
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nijA02 | 3.30.1220.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Yjia; Chain: A;domain 2 › CobW-like, C-terminal domain | 0.60 | 31.0 | 3.51e-01 | 74.5% | 64.7% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.57 | 27.0 | 3.83e-01 | 72.6% | 100.0% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.56 | 36.0 | 3.40e-01 | 77.1% | 52.7% |
| 2x1cB01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.55 | 38.0 | 3.20e-01 | 71.3% | 88.3% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.54 | 40.0 | 3.84e-01 | 75.2% | 96.6% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 36.0 | 4.02e-01 | 79.6% | 86.3% |
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 43.0 | 4.12e-01 | 86.0% | 94.9% |
| 3ghgB02 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.52 | 38.0 | 3.25e-01 | 76.4% | 94.7% |
| 2i1sA00 | 3.10.290.30 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like | 0.51 | 32.0 | 3.07e-01 | 82.2% | 52.8% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 35.0 | 3.64e-01 | 73.9% | 77.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.63 | 34.0 | 4.50e-01 | 73.9% | 100.0% |
| 4982722 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.62 | 34.0 | 4.58e-01 | 74.5% | 100.0% |
| 3714639 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.60 | 43.0 | 4.09e-01 | 73.9% | 86.3% |
| 4386515 | 330.1.1.30 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 | 0.60 | 23.0 | 3.57e-01 | 79.6% | 86.2% |
| 3246337 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 41.0 | 3.71e-01 | 77.1% | 56.6% |
| 4952738 | 322.1.1.2 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › 3H | 0.54 | 31.0 | 3.69e-01 | 75.2% | 79.8% |
| 1144780 | 219.1.1.69 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE | 0.54 | 36.0 | 4.02e-01 | 79.6% | 86.3% |
| 4041829 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.53 | 38.0 | 3.31e-01 | 79.0% | 48.1% |
| 5074866 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.53 | 39.0 | 3.68e-01 | 75.8% | 99.5% |
| 3718679 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.53 | 39.0 | 3.48e-01 | 77.1% | 95.2% |
| 3714422 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.52 | 38.0 | 3.31e-01 | 73.9% | 91.1% |
| 150850 | 219.1.1.57 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CIF | 0.52 | 45.0 | 3.82e-01 | 90.4% | 63.5% |
| 5009919 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 42.0 | 3.85e-01 | 85.4% | 86.6% |
| 4638995 | 71.1.1.15 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 | 0.52 | 42.0 | 3.89e-01 | 83.4% | 95.4% |
| 1165706 | 219.1.1.57 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CIF | 0.52 | 45.0 | 4.31e-01 | 90.4% | 91.5% |
| 3718526 | 219.3.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › AnkH, inserted middle domain › AnkH, inserted middle domain | 0.52 | 47.0 | 3.87e-01 | 98.7% | 64.5% |
| 3623256 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.51 | 39.0 | 3.53e-01 | 79.6% | 98.1% |
| 5057532 | 101.1.2.893 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2226 | 0.51 | 43.0 | 3.51e-01 | 89.2% | 61.8% |
| 3928426 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.51 | 39.0 | 3.45e-01 | 81.5% | 97.0% |
| 4203220 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.51 | 38.0 | 3.64e-01 | 77.1% | 98.3% |
| 5014023 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.50 | 43.0 | 4.05e-01 | 89.8% | 98.4% |