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YP_009666078.1
Arc-VirNC_043427__YP_009666078.1__FK997-gp33__00033
Identity
- Accession:
- NC_043427 ↗
- Protein ID:
- YP_009666078.1 ↗
- Kingdom:
- archaea
Quality
87.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-76
Domain cluster:
rep: IMGVR_UViG_3300002481_000019-3300002481-JGI24020J35080_10022768__D9-62
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01710.23 best | HTH_Tnp_IS630 | 31.0 | 3.20e-07 | 95.2% | 43.7% |
| PF01527.27 | HTH_Tnp_1 | 26.5 | 8.50e-06 | 95.2% | 72.0% |
| PF13518.13 | HTH_28 | 28.2 | 2.20e-06 | 58.7% | 59.6% |
| PF13384.13 | HTH_23 | 34.2 | 2.20e-08 | 57.1% | 62.0% |
| PF02796.22 | HTH_7 | 36.5 | 6.10e-09 | 55.6% | 71.1% |
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.76 | 56.0 | 3.91e-01 | 79.4% | 26.7% |
| 3oioA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 68.0 | 5.61e-01 | 100.0% | 91.1% |
| 4fe7A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 63.0 | 5.35e-01 | 95.2% | 94.5% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 56.0 | 5.06e-01 | 81.0% | 71.3% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 66.0 | 5.58e-01 | 100.0% | 97.1% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 55.0 | 4.90e-01 | 79.4% | 70.5% |
| 1a9xA04 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.74 | 53.0 | 3.98e-01 | 76.2% | 44.0% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 5.77e-01 | 82.5% | 91.4% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 49.0 | 5.16e-01 | 79.4% | 82.1% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 5.08e-01 | 84.1% | 67.5% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 53.0 | 5.20e-01 | 79.4% | 88.1% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 4.67e-01 | 79.4% | 68.5% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 49.0 | 4.53e-01 | 73.0% | 75.0% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 4.77e-01 | 79.4% | 74.4% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 5.21e-01 | 84.1% | 77.8% |
| 2ijlB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 4.32e-01 | 79.4% | 56.0% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 5.36e-01 | 79.4% | 87.9% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 5.08e-01 | 84.1% | 74.7% |
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 55.0 | 5.13e-01 | 90.5% | 73.2% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 48.0 | 4.15e-01 | 74.6% | 50.5% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 50.0 | 4.90e-01 | 77.8% | 77.1% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 50.0 | 5.05e-01 | 77.8% | 85.7% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 53.0 | 5.53e-01 | 84.1% | 96.4% |
| 1b9mB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 4.26e-01 | 77.8% | 55.6% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 46.0 | 4.65e-01 | 71.4% | 93.7% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.49e-01 | 79.4% | 72.9% |
| 4ev0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 45.0 | 4.28e-01 | 73.0% | 72.7% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.56e-01 | 77.8% | 79.5% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 4.59e-01 | 82.5% | 69.7% |
| 3s5rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 55.0 | 3.93e-01 | 100.0% | 40.3% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.63 | 49.0 | 4.00e-01 | 88.9% | 48.9% |
| 8h4pA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.63 | 55.0 | 3.52e-01 | 96.8% | 31.8% |
| 7watB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 53.0 | 3.42e-01 | 96.8% | 33.6% |
| 3ni7A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 54.0 | 3.96e-01 | 98.4% | 42.0% |
| 4xviA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.62 | 47.0 | 3.70e-01 | 85.7% | 67.4% |
| 1br2A03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.61 | 50.0 | 4.33e-01 | 87.3% | 85.3% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 53.0 | 4.71e-01 | 95.2% | 97.7% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.61 | 48.0 | 3.72e-01 | 90.5% | 82.6% |
| 2ke4A00 | 6.10.140.470 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 50.0 | 4.39e-01 | 98.4% | 60.2% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 53.0 | 4.73e-01 | 98.4% | 97.8% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.11e-01 | 100.0% | 62.3% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 3.69e-01 | 84.1% | 50.4% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.60 | 52.0 | 4.10e-01 | 96.8% | 47.6% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.18e-01 | 85.7% | 100.0% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.59 | 46.0 | 3.61e-01 | 88.9% | 80.6% |
| 4x0qA04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.56 | 45.0 | 3.54e-01 | 90.5% | 80.6% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 46.0 | 3.66e-01 | 92.1% | 62.6% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.53 | 42.0 | 4.10e-01 | 90.5% | 94.3% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 3.84e-01 | 95.2% | 77.1% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4010677 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.84 | 73.0 | 6.15e-01 | 93.7% | 64.0% |
| 3282193 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 58.0 | 6.42e-01 | 73.0% | 100.0% |
| 4471924 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 58.0 | 6.21e-01 | 74.6% | 94.5% |
| 3956134 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 58.0 | 6.20e-01 | 74.6% | 96.4% |
| 3969568 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 58.0 | 6.19e-01 | 74.6% | 94.5% |
| 4131872 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 57.0 | 6.04e-01 | 74.6% | 94.5% |
| 3977556 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 56.0 | 5.96e-01 | 76.2% | 98.2% |
| 3289875 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.78 | 65.0 | 5.85e-01 | 93.7% | 71.1% |
| 3971154 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.78 | 58.0 | 5.62e-01 | 79.4% | 80.0% |
| 3964790 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.78 | 69.0 | 5.80e-01 | 98.4% | 92.4% |
| 3981688 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.78 | 61.0 | 6.12e-01 | 85.7% | 87.7% |
| 4590066 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.77 | 65.0 | 5.37e-01 | 93.7% | 55.8% |
| None | — | 0.77 | 69.0 | 5.89e-01 | 100.0% | 100.0% | |
| 3289244 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.77 | 62.0 | 6.18e-01 | 88.9% | 92.3% |
| 3285795 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 55.0 | 5.82e-01 | 74.6% | 96.4% |
| 3973662 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 63.0 | 5.45e-01 | 93.7% | 63.0% |
| 3283959 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 62.0 | 5.59e-01 | 93.7% | 72.2% |
| 2761 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.75 | 56.0 | 5.06e-01 | 81.0% | 71.3% |
| 3981026 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.75 | 67.0 | 5.63e-01 | 100.0% | 97.1% |
| 5053441 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.75 | 49.0 | 5.08e-01 | 74.6% | 71.7% |
| 3288310 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 58.0 | 5.69e-01 | 87.3% | 84.3% |
| 4211867 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.74 | 66.0 | 5.48e-01 | 100.0% | 93.6% |
| 3953111 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.74 | 55.0 | 5.30e-01 | 79.4% | 78.6% |
| 4955851 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.73 | 54.0 | 3.80e-01 | 79.4% | 30.0% |
| 4492035 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.73 | 54.0 | 5.25e-01 | 79.4% | 78.6% |
| 4404485 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.73 | 53.0 | 5.47e-01 | 77.8% | 86.7% |
| 4987653 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.73 | 47.0 | 5.34e-01 | 77.8% | 91.1% |
| 4973199 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.73 | 57.0 | 5.80e-01 | 92.1% | 88.3% |
| 3942695 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.72 | 56.0 | 5.59e-01 | 84.1% | 89.2% |
| 3603167 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.72 | 56.0 | 5.60e-01 | 92.1% | 81.5% |
| 4976803 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 53.0 | 4.76e-01 | 79.4% | 68.5% |
| 4297073 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.72 | 54.0 | 4.74e-01 | 79.4% | 68.9% |
| 3619451 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 51.0 | 5.04e-01 | 74.6% | 76.9% |
| 4014219 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.71 | 54.0 | 3.84e-01 | 81.0% | 41.1% |
| 4993585 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 51.0 | 5.21e-01 | 81.0% | 80.0% |
| 3975610 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.70 | 54.0 | 5.25e-01 | 84.1% | 77.1% |
| 3941460 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.70 | 52.0 | 5.19e-01 | 79.4% | 84.6% |
| 3974013 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.70 | 54.0 | 5.51e-01 | 84.1% | 86.7% |
| 2440126 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.70 | 54.0 | 5.00e-01 | 84.1% | 69.5% |
| 4971448 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.70 | 50.0 | 4.74e-01 | 76.2% | 65.3% |
| 5041148 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 51.0 | 4.95e-01 | 87.3% | 71.4% |
| 3290024 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.69 | 57.0 | 5.27e-01 | 92.1% | 73.8% |
| 3972270 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.69 | 54.0 | 5.24e-01 | 85.7% | 78.6% |
| 3280379 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.68 | 53.0 | 4.61e-01 | 85.7% | 59.0% |
| 3286796 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.68 | 51.0 | 4.44e-01 | 79.4% | 55.8% |
| 3962552 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.68 | 54.0 | 5.14e-01 | 88.9% | 77.3% |
| 5011873 | 4156.1.1.6 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc | 0.66 | 52.0 | 3.84e-01 | 96.8% | 32.7% |
| 4974224 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 52.0 | 5.36e-01 | 98.4% | 96.7% |
| 4998383 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.65 | 48.0 | 4.25e-01 | 79.4% | 77.9% |
| 3991300 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 54.0 | 4.98e-01 | 100.0% | 76.2% |
| 4458965 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.58 | 53.0 | 4.88e-01 | 100.0% | 91.3% |
| 4048446 | 148.1.3.26 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 | 0.58 | 49.0 | 3.34e-01 | 98.4% | 25.7% |
| 3278243 | 101.1.4.10 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1870 | 0.55 | 45.0 | 3.61e-01 | 88.9% | 50.0% |
| 2970332 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.55 | 45.0 | 3.50e-01 | 93.7% | 58.7% |
| 4848450 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.54 | 44.0 | 3.51e-01 | 93.7% | 60.4% |
| 3198767 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.50 | 42.0 | 4.38e-01 | 95.2% | 93.3% |
D2
high
residues 84-176
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q5nA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.68 | 41.0 | 4.33e-01 | 91.4% | 67.9% |
| 2uy1A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 53.0 | 3.45e-01 | 90.3% | 39.7% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.62 | 52.0 | 4.26e-01 | 93.5% | 96.1% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.61 | 51.0 | 3.94e-01 | 92.5% | 90.1% |
| 6ks6G01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.57 | 48.0 | 3.51e-01 | 93.5% | 86.5% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 43.0 | 4.02e-01 | 87.1% | 91.0% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 43.0 | 3.88e-01 | 87.1% | 72.3% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 42.0 | 4.40e-01 | 91.4% | 97.6% |
| 2hnlA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 37.0 | 3.61e-01 | 76.3% | 91.8% |
| 1xd4A03 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.52 | 42.0 | 3.28e-01 | 92.5% | 53.5% |
| 4uskA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.51 | 38.0 | 3.28e-01 | 91.4% | 48.1% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.51 | 42.0 | 3.99e-01 | 93.5% | 93.8% |
| 1ugoA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.50 | 35.0 | 3.51e-01 | 72.0% | 98.0% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 43.0 | 3.84e-01 | 97.8% | 82.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4984686 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.85 | 74.0 | 7.14e-01 | 93.5% | 88.6% |
| 4998253 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.79 | 41.0 | 4.97e-01 | 87.1% | 78.3% |
| 3236092 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.61 | 48.0 | 5.11e-01 | 86.0% | 98.8% |
| 3351905 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.61 | 46.0 | 3.60e-01 | 81.7% | 83.3% |
| 3528431 | 633.21.1.24 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › PF25970 | 0.61 | 49.0 | 4.57e-01 | 86.0% | 96.5% |
| 3943035 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.57 | 38.0 | 4.35e-01 | 72.0% | 98.5% |
| 4967993 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.57 | 44.0 | 4.63e-01 | 89.2% | 92.8% |
| 4946659 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 42.0 | 4.01e-01 | 79.6% | 100.0% |
| 3455585 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.56 | 46.0 | 4.54e-01 | 95.7% | 86.0% |
| 3973500 | 601.1.2.144 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › HBM | 0.52 | 41.0 | 3.85e-01 | 86.0% | 97.4% |
| 4965784 | 3455.1.1.17 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors › DUF7853 | 0.52 | 41.0 | 4.27e-01 | 86.0% | 100.0% |
| 4928310 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.51 | 41.0 | 4.15e-01 | 92.5% | 90.3% |
| 3488467 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.50 | 41.0 | 3.92e-01 | 94.6% | 86.1% |
D3
high
residues 186-229_285-397
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.74 | 56.0 | 5.46e-01 | 78.3% | 100.0% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.74 | 62.0 | 5.47e-01 | 87.9% | 98.2% |
| 1aihA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.72 | 60.0 | 5.83e-01 | 86.0% | 92.4% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.71 | 57.0 | 5.29e-01 | 83.4% | 100.0% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.66 | 27.0 | 4.09e-01 | 96.8% | 92.1% |
| 2cazE00 | 1.20.1440.200 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Vps28 N-terminal domain | 0.54 | 29.0 | 3.52e-01 | 99.4% | 79.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4004483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 63.0 | 5.83e-01 | 86.0% | 96.3% |
| 3498502 | 627.1.1.2 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › DUF5601 | 0.60 | 29.0 | 3.66e-01 | 98.7% | 74.7% |
| 4962406 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 33.0 | 3.09e-01 | 100.0% | 41.4% |
| 3743047 | 604.5.1.28 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TBCC_N | 0.55 | 29.0 | 3.77e-01 | 99.4% | 91.8% |
| 3714093 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 26.0 | 3.15e-01 | 100.0% | 68.0% |
| 3940870 | 3069.1.1.1 ↗ | alpha arrays › BART › BART › BART › ARL2_Bind_BART | 0.52 | 31.0 | 3.34e-01 | 92.4% | 66.7% |
| 3233936 | 627.1.1.2 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › DUF5601 | 0.52 | 31.0 | 3.96e-01 | 73.2% | 100.0% |
| 5008649 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.50 | 33.0 | 3.07e-01 | 100.0% | 51.5% |
| 5043389 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.50 | 33.0 | 3.06e-01 | 100.0% | 51.5% |
D4
medium
residues 230-284
Domain cluster:
representative
CATH (82)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 52.0 | 4.03e-01 | 74.5% | 34.1% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 53.0 | 4.22e-01 | 100.0% | 40.8% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.71 | 52.0 | 3.84e-01 | 80.0% | 82.2% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.70 | 50.0 | 3.71e-01 | 76.4% | 30.4% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 51.0 | 4.65e-01 | 100.0% | 57.7% |
| 1f98A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.69 | 50.0 | 3.86e-01 | 78.2% | 94.4% |
| 6zj8D01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.69 | 48.0 | 3.84e-01 | 74.5% | 37.7% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.69 | 48.0 | 5.35e-01 | 78.2% | 100.0% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.68 | 47.0 | 3.82e-01 | 74.5% | 40.0% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.68 | 48.0 | 3.95e-01 | 76.4% | 41.2% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.68 | 51.0 | 3.08e-01 | 80.0% | 15.9% |
| 3b33A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.67 | 46.0 | 3.81e-01 | 74.5% | 38.5% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.66 | 47.0 | 3.55e-01 | 78.2% | 30.4% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 45.0 | 3.22e-01 | 76.4% | 23.6% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 56.0 | 4.87e-01 | 100.0% | 94.3% |
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 48.0 | 3.59e-01 | 80.0% | 34.8% |
| 1dleB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 44.0 | 3.34e-01 | 72.7% | 47.9% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.64 | 47.0 | 3.31e-01 | 81.8% | 42.9% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.64 | 49.0 | 3.70e-01 | 83.6% | 36.9% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.64 | 49.0 | 3.47e-01 | 85.5% | 86.6% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 43.0 | 3.55e-01 | 80.0% | 38.2% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.64 | 54.0 | 4.34e-01 | 100.0% | 80.3% |
| 3c19A02 | 3.10.20.300 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain | 0.64 | 43.0 | 3.84e-01 | 72.7% | 50.0% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 45.0 | 2.92e-01 | 76.4% | 28.4% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 46.0 | 3.79e-01 | 80.0% | 98.2% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 49.0 | 3.92e-01 | 85.5% | 45.9% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.63 | 50.0 | 4.07e-01 | 92.7% | 71.7% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 51.0 | 3.66e-01 | 94.5% | 58.0% |
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.61 | 46.0 | 3.17e-01 | 81.8% | 40.8% |
| 3lidA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 48.0 | 3.70e-01 | 89.1% | 41.0% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 44.0 | 3.24e-01 | 78.2% | 29.9% |
| 7vljA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.61 | 44.0 | 3.78e-01 | 78.2% | 97.8% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.61 | 46.0 | 4.29e-01 | 94.5% | 66.2% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 39.0 | 3.22e-01 | 100.0% | 35.3% |
| 4efjA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 48.0 | 3.74e-01 | 96.4% | 55.0% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 51.0 | 4.17e-01 | 100.0% | 70.3% |
| 2jysA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.60 | 42.0 | 3.66e-01 | 76.4% | 70.3% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 40.0 | 3.59e-01 | 72.7% | 46.9% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 43.0 | 3.39e-01 | 78.2% | 38.2% |
| 4l22A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 44.0 | 2.67e-01 | 83.6% | 39.3% |
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 53.0 | 3.84e-01 | 100.0% | 45.0% |
| 3ub1D02 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 50.0 | 4.00e-01 | 96.4% | 67.5% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 51.0 | 3.14e-01 | 96.4% | 16.8% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 52.0 | 4.58e-01 | 100.0% | 89.2% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 49.0 | 3.64e-01 | 96.4% | 69.4% |
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 49.0 | 3.61e-01 | 100.0% | 60.5% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 43.0 | 3.21e-01 | 80.0% | 83.3% |
| 4lrzE02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 40.0 | 3.46e-01 | 74.5% | 42.6% |
| 2pgeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 48.0 | 3.77e-01 | 96.4% | 47.2% |
| 1sr4B00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.58 | 46.0 | 3.01e-01 | 96.4% | 19.0% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 49.0 | 3.77e-01 | 98.2% | 93.9% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 47.0 | 3.92e-01 | 100.0% | 49.1% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.19e-01 | 78.2% | 35.9% |
| 1tzzB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 45.0 | 3.77e-01 | 100.0% | 52.1% |
| 6kmoB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 2.94e-01 | 94.5% | 16.8% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.57 | 39.0 | 3.76e-01 | 76.4% | 61.5% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 3.14e-01 | 94.5% | 45.3% |
| 7rd0A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 42.0 | 2.67e-01 | 83.6% | 72.4% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.56 | 47.0 | 3.66e-01 | 94.5% | 72.0% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.56 | 40.0 | 3.38e-01 | 78.2% | 67.3% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 46.0 | 3.48e-01 | 89.1% | 78.6% |
| 2cy5A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 45.0 | 3.61e-01 | 100.0% | 52.7% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 46.0 | 3.48e-01 | 96.4% | 68.9% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 45.0 | 2.96e-01 | 92.7% | 22.5% |
| 1s3rA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.56 | 41.0 | 4.17e-01 | 76.4% | 84.9% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.55 | 44.0 | 3.34e-01 | 90.9% | 68.3% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.55 | 37.0 | 3.71e-01 | 74.5% | 68.4% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 41.0 | 3.18e-01 | 83.6% | 35.8% |
| 2i9wA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.21e-01 | 96.4% | 41.5% |
| 3akoC00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 37.0 | 2.80e-01 | 76.4% | 26.8% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 41.0 | 3.85e-01 | 87.3% | 73.2% |
| 2g2sA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.54 | 37.0 | 3.56e-01 | 76.4% | 62.5% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 44.0 | 3.79e-01 | 98.2% | 60.6% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.53 | 42.0 | 3.02e-01 | 90.9% | 31.1% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 37.0 | 2.42e-01 | 76.4% | 38.3% |
| 1jt8A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 3.59e-01 | 96.4% | 75.5% |
| 1cjxB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 37.0 | 2.63e-01 | 80.0% | 34.7% |
| 3gkmA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 40.0 | 3.07e-01 | 94.5% | 75.2% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.52 | 37.0 | 3.09e-01 | 85.5% | 40.4% |
| 1nf3C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 40.0 | 3.34e-01 | 100.0% | 79.7% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 40.0 | 3.05e-01 | 94.5% | 88.7% |
| 4jgpA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 34.0 | 2.97e-01 | 74.5% | 41.4% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959104 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.80 | 56.0 | 4.36e-01 | 74.5% | 36.5% |
| 4958220 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.77 | 54.0 | 4.10e-01 | 74.5% | 33.8% |
| 4226251 | 375.1.1.252 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27302 | 0.75 | 52.0 | 5.07e-01 | 81.8% | 66.7% |
| 4960078 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.75 | 53.0 | 3.37e-01 | 74.5% | 16.9% |
| 3942790 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.75 | 52.0 | 4.90e-01 | 72.7% | 61.5% |
| 4930499 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.74 | 52.0 | 3.38e-01 | 74.5% | 18.3% |
| 3651210 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 52.0 | 5.08e-01 | 83.6% | 68.3% |
| 5048403 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.73 | 51.0 | 4.22e-01 | 74.5% | 43.0% |
| 4405445 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.73 | 54.0 | 5.00e-01 | 83.6% | 62.9% |
| 3517350 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.72 | 55.0 | 3.38e-01 | 83.6% | 15.1% |
| 3577516 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.72 | 52.0 | 3.37e-01 | 76.4% | 18.4% |
| 3585516 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.72 | 50.0 | 4.51e-01 | 74.5% | 56.4% |
| 3642588 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.71 | 48.0 | 3.83e-01 | 72.7% | 36.2% |
| 4950605 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.71 | 50.0 | 3.86e-01 | 74.5% | 34.4% |
| 5034773 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.71 | 53.0 | 4.20e-01 | 80.0% | 40.0% |
| 3218749 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.71 | 52.0 | 5.09e-01 | 78.2% | 71.7% |
| 4353676 | 223.1.1.41 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HisK_sensor | 0.70 | 52.0 | 3.94e-01 | 80.0% | 85.9% |
| 4980660 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.70 | 52.0 | 4.15e-01 | 80.0% | 40.9% |
| 5044346 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.70 | 50.0 | 4.02e-01 | 76.4% | 38.2% |
| 4929236 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.70 | 51.0 | 4.66e-01 | 80.0% | 60.0% |
| 4952182 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.70 | 52.0 | 4.14e-01 | 80.0% | 40.0% |
| 3212189 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.70 | 60.0 | 4.77e-01 | 98.2% | 56.5% |
| 4999855 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.70 | 49.0 | 3.90e-01 | 74.5% | 38.2% |
| 4963337 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.69 | 50.0 | 3.80e-01 | 76.4% | 34.6% |
| 5050898 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.69 | 48.0 | 4.41e-01 | 72.7% | 60.0% |
| 4935912 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.69 | 51.0 | 4.71e-01 | 83.6% | 61.4% |
| 4959068 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.69 | 49.0 | 3.05e-01 | 76.4% | 14.0% |
| 4043495 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 47.0 | 3.30e-01 | 74.5% | 23.6% |
| 3253359 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 56.0 | 3.47e-01 | 92.7% | 32.1% |
| 3637283 | 5.1.4.441 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin-link | 0.68 | 52.0 | 3.13e-01 | 81.8% | 15.4% |
| 5031967 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.68 | 50.0 | 4.01e-01 | 78.2% | 40.9% |
| 4951932 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.68 | 48.0 | 2.98e-01 | 74.5% | 14.7% |
| 3985160 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.67 | 50.0 | 4.02e-01 | 81.8% | 40.0% |
| 5002461 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.67 | 47.0 | 3.64e-01 | 72.7% | 35.0% |
| 3971053 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.66 | 49.0 | 3.95e-01 | 80.0% | 41.8% |
| 4982570 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.66 | 47.0 | 4.40e-01 | 80.0% | 60.0% |
| 3901529 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.66 | 50.0 | 4.16e-01 | 81.8% | 68.4% |
| 4346250 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.66 | 50.0 | 3.68e-01 | 81.8% | 32.1% |
| 5047293 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.66 | 46.0 | 3.54e-01 | 74.5% | 31.5% |
| 5031616 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.66 | 47.0 | 4.78e-01 | 80.0% | 78.2% |
| 3612689 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 58.0 | 4.62e-01 | 100.0% | 57.3% |
| 5051876 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.66 | 46.0 | 3.60e-01 | 74.5% | 34.4% |
| 4045121 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.65 | 49.0 | 4.45e-01 | 85.5% | 60.0% |
| 4930368 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.65 | 45.0 | 3.69e-01 | 74.5% | 37.3% |
| 3954468 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 48.0 | 3.36e-01 | 80.0% | 65.3% |
| 3289119 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 44.0 | 2.63e-01 | 70.9% | 10.1% |
| 3456692 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.65 | 47.0 | 4.68e-01 | 89.1% | 72.9% |
| 4984061 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.64 | 55.0 | 3.44e-01 | 98.2% | 78.0% |
| 3676628 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.64 | 48.0 | 3.88e-01 | 98.2% | 40.0% |
| 3834362 | 3832.1.1.2 ↗ | alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › PF25968 | 0.63 | 55.0 | 3.19e-01 | 100.0% | 86.2% |
| 4983267 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.63 | 48.0 | 3.43e-01 | 85.5% | 28.6% |
| 3270992 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.63 | 46.0 | 3.55e-01 | 81.8% | 35.7% |
| 3832543 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.63 | 55.0 | 3.01e-01 | 100.0% | 20.0% |
| 5023444 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.63 | 45.0 | 3.69e-01 | 78.2% | 68.2% |
| 3645842 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.62 | 47.0 | 4.30e-01 | 98.2% | 60.0% |
| 3588750 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.62 | 46.0 | 4.29e-01 | 85.5% | 62.7% |
| 3863194 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 52.0 | 4.06e-01 | 100.0% | 70.8% |
| 5055900 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.61 | 43.0 | 3.25e-01 | 74.5% | 31.4% |
| 4086554 | 11.10.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › Sina_TRAF | 0.61 | 50.0 | 3.87e-01 | 96.4% | 86.7% |
| 5013672 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 51.0 | 4.92e-01 | 100.0% | 87.7% |
| 4971399 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 52.0 | 4.23e-01 | 100.0% | 89.1% |
| 3345737 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.60 | 50.0 | 3.14e-01 | 92.7% | 39.4% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.60 | 50.0 | 4.05e-01 | 98.2% | 61.7% |
| 4988723 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.60 | 44.0 | 3.54e-01 | 80.0% | 39.1% |
| 1159602 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.60 | 51.0 | 4.16e-01 | 100.0% | 69.6% |
| 3710433 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.60 | 50.0 | 4.08e-01 | 98.2% | 76.4% |
| 3824181 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.60 | 44.0 | 4.37e-01 | 81.8% | 81.7% |
| 5055280 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.59 | 41.0 | 3.11e-01 | 74.5% | 33.1% |
| 4935307 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 40.0 | 3.73e-01 | 76.4% | 52.5% |
| 3581254 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 42.0 | 4.28e-01 | 85.5% | 80.0% |
| 4018089 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 48.0 | 3.81e-01 | 96.4% | 71.7% |
| 2490256 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.57 | 39.0 | 3.75e-01 | 76.4% | 60.6% |
| 4137219 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.57 | 48.0 | 4.02e-01 | 100.0% | 54.0% |
| 2494924 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.56 | 46.0 | 4.25e-01 | 100.0% | 75.6% |
| 5018717 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 39.0 | 3.96e-01 | 78.2% | 74.5% |
| 3771406 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 45.0 | 3.65e-01 | 100.0% | 43.2% |
| 3819309 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.56 | 46.0 | 4.04e-01 | 92.7% | 75.3% |
| 3402087 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.56 | 45.0 | 3.32e-01 | 96.4% | 32.4% |
| 4511768 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.55 | 46.0 | 2.94e-01 | 100.0% | 92.6% |
| 3258452 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 45.0 | 3.58e-01 | 92.7% | 50.0% |
| 3833240 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.55 | 37.0 | 3.17e-01 | 70.9% | 40.9% |
| 5055744 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.55 | 47.0 | 2.88e-01 | 96.4% | 68.7% |
| 4797813 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.55 | 37.0 | 3.71e-01 | 74.5% | 68.4% |
| 4021885 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.54 | 37.0 | 2.53e-01 | 74.5% | 26.1% |
| 4191459 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.54 | 47.0 | 3.70e-01 | 100.0% | 51.7% |
| 4771028 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.54 | 36.0 | 3.57e-01 | 76.4% | 63.5% |
| 3179468 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.53 | 43.0 | 3.26e-01 | 96.4% | 68.8% |
| 3619212 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.53 | 37.0 | 2.41e-01 | 78.2% | 18.7% |
| 4106730 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.53 | 45.0 | 3.47e-01 | 100.0% | 52.6% |
| None | — | 0.53 | 36.0 | 2.98e-01 | 76.4% | 36.0% | |
| 3301984 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 37.0 | 3.76e-01 | 76.4% | 83.6% |
| 3692621 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 45.0 | 3.49e-01 | 100.0% | 49.2% |
| 3391411 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 34.0 | 3.80e-01 | 81.8% | 97.5% |
| 865437 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.50 | 42.0 | 3.11e-01 | 94.5% | 66.9% |