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NC_043469.1__YP_009666210.1__FLA17_gp40__00040
Bact-VirNC_043469.1__YP_009666210.1__FLA17_gp40__00040
Identity
- Accession:
- NC_043469 ↗
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Taxonomy
TaxID: 2886900
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-132
Domain cluster:
rep: JX100810.1__AFU87987.1__CcrColossus_gp117__00116__D124-259
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08809.17 best | DUF1799 | 56.1 | 5.00e-15 | 74.1% | 98.8% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fbiD00 | 1.10.10.1340 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Mediator of RNA polymerase II, submodule Med31 (Soh1) | 0.54 | 31.0 | 3.27e-01 | 99.1% | 61.7% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.51 | 35.0 | 3.20e-01 | 70.4% | 58.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4012308 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.75 | 41.0 | 4.93e-01 | 93.5% | 81.4% |
| 3994728 | 7094.1.1.3 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C | 0.61 | 49.0 | 4.49e-01 | 99.1% | 66.4% |
| 3276622 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.60 | 29.0 | 3.40e-01 | 89.8% | 64.0% |
| 3595117 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.56 | 33.0 | 2.66e-01 | 88.9% | 29.5% |
| 4674000 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.53 | 46.0 | 4.24e-01 | 100.0% | 74.1% |
| 3007060 | 3003.1.1.1 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › MCM_N | 0.51 | 42.0 | 4.04e-01 | 94.4% | 78.0% |
| 3448755 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.50 | 43.0 | 3.22e-01 | 100.0% | 77.2% |