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NC_047713.1__YP_009778627.1__HOQ62_gp187__00187
Bact-VirNC_047713.1__YP_009778627.1__HOQ62_gp187__00187
Identity
- Accession:
- NC_047713 ↗
- Kingdom:
- phage
Quality
69.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Atlauavirus›
Synechococcus_phage_ACG-2014f_Syn7803C8
TaxID: 2790336
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-57
D2
medium
residues 423-455_552-638
D3
medium
residues 456-551
Domain cluster:
representative
D4
medium
residues 751-949
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 26.0 | 3.33e-01 | 88.4% | 72.2% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 31.0 | 3.63e-01 | 92.5% | 76.7% |
| 4q5qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 30.0 | 3.93e-01 | 85.9% | 100.0% |
| 8g59R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 28.0 | 2.60e-01 | 91.5% | 38.1% |
| 1rcwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.50 | 36.0 | 3.56e-01 | 93.5% | 66.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388455 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 32.0 | 4.13e-01 | 92.0% | 87.0% |
| 4980806 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.56 | 28.0 | 3.56e-01 | 80.4% | 78.3% |
| 3270646 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 39.0 | 3.71e-01 | 70.4% | 92.8% |
| 3549234 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.55 | 31.0 | 3.76e-01 | 94.0% | 83.1% |
| 4535879 | 5050.1.1.18 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PUCC | 0.52 | 41.0 | 4.13e-01 | 81.9% | 96.6% |