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NC_047714.1__YP_009778925.1__HOQ63_gp198__00198
Bact-VirNC_047714.1__YP_009778925.1__HOQ63_gp198__00198
Identity
- Accession:
- NC_047714 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Atlauavirus›
Synechococcus_phage_ACG-2014f_Syn7803US26
TaxID: 2790346
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-50
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hyeA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.59 | 48.0 | 3.42e-01 | 95.7% | 86.0% |
| 1x9gA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.56 | 48.0 | 3.18e-01 | 95.7% | 42.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3621403 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.64 | 52.0 | 3.61e-01 | 89.1% | 37.3% |
| 3836254 | 109.4.1.578 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3730 | 0.60 | 49.0 | 3.16e-01 | 89.1% | 20.9% |
| 3828651 | 109.4.1.621 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 | 0.56 | 45.0 | 3.36e-01 | 89.1% | 36.8% |
D2
high
residues 61-232
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00105__D20-173
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13529.14 best | Peptidase_C39_2 | 58.1 | 2.00e-15 | 95.9% | 90.0% |
| PF12385.15 | Peptidase_C70 | 25.3 | 1.70e-05 | 85.5% | 92.2% |
D3
medium
residues 243-303
Domain cluster:
rep: OQ718882.1__WHM52888.1__IOBOPIKK_00083__00081__D5-62
D4
medium
residues 304-405
Domain cluster:
rep: HQ615693.1__AEC53059.1__SCRM01_113c__00113__D112-185
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00959.25 best | Phage_lysozyme | 42.6 | 1.00e-10 | 94.1% | 72.0% |