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NC_047714.1__YP_009778925.1__HOQ63_gp198__00198

Bact-Vir

NC_047714.1__YP_009778925.1__HOQ63_gp198__00198

Identity

Accession:
NC_047714 ↗
Kingdom:
phage

Quality

88.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-50
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hyeA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.59 48.0 3.42e-01 95.7% 86.0%
1x9gA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.56 48.0 3.18e-01 95.7% 42.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621403 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.64 52.0 3.61e-01 89.1% 37.3%
3836254 109.4.1.578 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3730 0.60 49.0 3.16e-01 89.1% 20.9%
3828651 109.4.1.621 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.56 45.0 3.36e-01 89.1% 36.8%
D2 high residues 61-232
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13529.14 best Peptidase_C39_2 58.1 2.00e-15 95.9% 90.0%
PF12385.15 Peptidase_C70 25.3 1.70e-05 85.5% 92.2%
D3 medium residues 243-303
PDB
D4 medium residues 304-405
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00959.25 best Phage_lysozyme 42.6 1.00e-10 94.1% 72.0%