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NC_047717.1__YP_009779476.1__HOQ66_gp169__00063

Bact-Vir

NC_047717.1__YP_009779476.1__HOQ66_gp169__00063

Identity

Accession:
NC_047717 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-63
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pufL00 2.40.128.680 Mainly Beta › Beta Barrel › Lipocalin › 0.52 38.0 3.09e-01 86.3% 39.7%
8ckpA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 2.71e-01 100.0% 51.8%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.51 39.0 2.90e-01 84.3% 81.6%
2gysA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.31e-01 100.0% 48.4%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 35.0 2.51e-01 76.5% 95.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999029 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.58 42.0 2.74e-01 78.4% 98.8%
3764574 3338.2.1.1 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › Pep_M12B_propep 0.56 46.0 3.51e-01 100.0% 84.3%
4102082 63.1.1.3 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH 0.53 36.0 2.66e-01 72.5% 69.7%
4342739 223.1.1.16 a+b three layers › Profilin-like › sensor domains › sensor domains › LuxQ-periplasm 0.50 40.0 2.67e-01 100.0% 80.8%
3270992 216.1.1.3 a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.50 37.0 2.81e-01 80.4% 59.3%