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NC_047717.1__YP_009779476.1__HOQ66_gp169__00063
Bact-VirNC_047717.1__YP_009779476.1__HOQ66_gp169__00063
Identity
- Accession:
- NC_047717 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Brizovirus›
Cyanophage_S-RIM12_isolate_W1_08_0910
TaxID: 2790660
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-63
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pufL00 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 38.0 | 3.09e-01 | 86.3% | 39.7% |
| 8ckpA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.71e-01 | 100.0% | 51.8% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 39.0 | 2.90e-01 | 84.3% | 81.6% |
| 2gysA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.31e-01 | 100.0% | 48.4% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 35.0 | 2.51e-01 | 76.5% | 95.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999029 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.58 | 42.0 | 2.74e-01 | 78.4% | 98.8% |
| 3764574 | 3338.2.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › Pep_M12B_propep | 0.56 | 46.0 | 3.51e-01 | 100.0% | 84.3% |
| 4102082 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.53 | 36.0 | 2.66e-01 | 72.5% | 69.7% |
| 4342739 | 223.1.1.16 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › LuxQ-periplasm | 0.50 | 40.0 | 2.67e-01 | 100.0% | 80.8% |
| 3270992 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.50 | 37.0 | 2.81e-01 | 80.4% | 59.3% |