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NC_047729.1__YP_009782138.1__QLX43_gp169__00058

Bact-Vir

NC_047729.1__YP_009782138.1__QLX43_gp169__00058

Identity

Accession:
NC_047729 ↗
Kingdom:
phage

Quality

89.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-67
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3sdeA03 6.10.250.1170 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.75 55.0 5.15e-01 77.4% 66.7%
1a8rA01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.71 52.0 4.65e-01 83.9% 56.5%
6nyyE01 1.20.58.760 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 0.66 52.0 3.80e-01 87.1% 54.3%
6cgaC02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 55.0 5.13e-01 95.2% 78.2%
3kzxA02 1.10.150.730 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.54 37.0 3.72e-01 71.0% 88.7%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002735 1049.2.1.0 alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain 0.86 79.0 6.77e-01 100.0% 66.3%
4957574 1049.2.1.0 alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain 0.82 75.0 6.43e-01 100.0% 68.4%
5002071 4168.1.1.0 alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.78 53.0 4.75e-01 93.5% 51.8%
3388093 3470.1.1.0 extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain 0.68 49.0 5.21e-01 88.7% 85.5%
3997881 109.4.1.194 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.65 47.0 2.99e-01 85.5% 16.8%
4029168 4984.1.1.0 alpha bundles › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain 0.60 50.0 3.95e-01 93.5% 43.8%