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NC_047735.1__YP_009783479.1__QLX27_gp106__00106

Bact-Vir

NC_047735.1__YP_009783479.1__QLX27_gp106__00106

Identity

Accession:
NC_047735 ↗
Kingdom:
phage

Quality

80.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-58
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f13B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.71 60.0 4.58e-01 100.0% 51.0%
4xzjA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.69 54.0 3.68e-01 86.0% 50.7%
6sjqA00 3.10.20.650 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.67 57.0 4.64e-01 98.2% 76.5%
6scxA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.66 56.0 4.38e-01 100.0% 62.2%
3aiiA02 2.40.240.100 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › 0.66 54.0 5.31e-01 100.0% 85.9%
1zpsA01 3.10.20.810 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase 0.66 55.0 4.80e-01 100.0% 78.9%
1ojqA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.65 50.0 3.42e-01 86.0% 64.2%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.64 50.0 3.50e-01 87.7% 98.0%
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.64 54.0 5.24e-01 100.0% 85.7%
1gzeA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.63 48.0 3.34e-01 86.0% 96.1%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 54.0 4.30e-01 96.5% 82.1%
2bb6A02 2.170.130.30 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › 0.63 51.0 4.32e-01 96.5% 88.7%
1oeyL00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 52.0 4.47e-01 100.0% 87.8%
4bfrB02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 53.0 4.13e-01 98.2% 64.1%
6k93A00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.62 48.0 3.19e-01 86.0% 41.0%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 52.0 4.50e-01 100.0% 74.0%
5c6dA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 50.0 4.26e-01 100.0% 81.3%
5ip4E00 3.10.20.230 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain 0.61 52.0 4.66e-01 100.0% 89.3%
2qejD01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.61 51.0 4.12e-01 98.2% 82.2%
2incC00 3.10.20.270 Alpha Beta › Roll › Ubiquitin-like (UB roll) › TmoB-like 0.61 51.0 4.57e-01 98.2% 96.4%
1r94A00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.60 43.0 3.67e-01 96.5% 45.4%
1x1mA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 50.0 4.24e-01 100.0% 80.4%
1mhxA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 50.0 4.86e-01 96.5% 84.6%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.59 45.0 3.18e-01 87.7% 98.0%
5ffiE00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.59 48.0 4.10e-01 96.5% 100.0%
4hpqB00 2.60.270.60 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 0.59 49.0 4.04e-01 100.0% 69.6%
2wxfA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 48.0 3.97e-01 100.0% 71.4%
1a70A00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.58 47.0 4.10e-01 98.2% 92.8%
2bkfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 49.0 4.41e-01 100.0% 98.8%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.51e-01 100.0% 78.1%
6u10A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 44.0 2.85e-01 84.2% 53.5%
1x0gA00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.57 40.0 3.35e-01 94.7% 42.2%
1yn3A00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 47.0 4.06e-01 98.2% 98.0%
1zxhA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 47.0 4.81e-01 98.2% 100.0%
1wmhB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 46.0 4.24e-01 98.2% 97.6%
4j80A02 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.56 41.0 4.04e-01 84.2% 75.8%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 3.79e-01 100.0% 86.7%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.56 48.0 4.34e-01 98.2% 79.7%
5wcmA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 43.0 2.85e-01 86.0% 54.8%
2dzmA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 46.0 4.37e-01 100.0% 100.0%
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 36.0 3.49e-01 78.9% 60.6%
3d37A03 3.30.1920.10 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold 0.54 35.0 3.52e-01 100.0% 65.0%
6vtmB00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 42.0 3.75e-01 98.2% 97.9%
1euvB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 43.0 3.98e-01 98.2% 88.6%
4m01A02 3.10.20.320 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) 0.52 41.0 3.88e-01 98.2% 98.7%
2y5pA00 2.60.40.4270 Mainly Beta › Sandwich › Immunoglobulin-like › Listeria-Bacteroides repeat domain 0.51 43.0 4.04e-01 96.5% 90.3%
4kdiD00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 41.0 3.88e-01 98.2% 100.0%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5041150 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.75 67.0 6.28e-01 100.0% 97.1%
5042815 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.73 62.0 5.68e-01 100.0% 86.3%
4507733 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.72 62.0 5.72e-01 100.0% 96.0%
3802388 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.72 61.0 5.49e-01 100.0% 77.1%
5041151 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.72 61.0 5.77e-01 98.2% 95.7%
4947785 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.71 60.0 5.75e-01 100.0% 85.5%
4951496 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.71 61.0 5.41e-01 100.0% 84.7%
4959950 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.70 59.0 5.31e-01 100.0% 84.7%
5022325 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.70 59.0 5.05e-01 100.0% 72.0%
5019872 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.69 59.0 5.25e-01 98.2% 84.7%
3247260 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 60.0 5.01e-01 98.2% 93.0%
4169889 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.69 59.0 5.57e-01 100.0% 94.3%
3601157 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.67 57.0 4.70e-01 98.2% 80.0%
4950806 4.6.1.8 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr 0.67 53.0 5.42e-01 100.0% 94.5%
3592225 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.67 58.0 5.09e-01 98.2% 89.4%
5042402 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.67 57.0 5.64e-01 100.0% 100.0%
2770682 221.1.1.62 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › BILBO1_N 0.66 57.0 4.69e-01 98.2% 79.4%
3613993 221.1.1.62 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › BILBO1_N 0.66 56.0 4.61e-01 98.2% 80.0%
3597362 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 55.0 4.46e-01 98.2% 80.0%
3342335 239.1.1.5 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C 0.65 54.0 4.62e-01 100.0% 84.0%
4567811 221.1.1.24 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblB 0.64 55.0 4.85e-01 98.2% 97.6%
4510393 221.1.1.21 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ub-RnfH 0.64 54.0 5.08e-01 96.5% 92.9%
3505338 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.64 55.0 4.97e-01 100.0% 98.8%
4602886 221.3.1.0 a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains 0.64 54.0 5.14e-01 100.0% 94.3%
3338200 239.3.1.0 beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.63 53.0 4.03e-01 100.0% 75.5%
6185 221.1.1.4 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.63 53.0 4.46e-01 100.0% 86.7%
4089044 221.1.1.21 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ub-RnfH 0.63 54.0 4.97e-01 98.2% 96.0%
4995785 221.3.1.0 a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains 0.63 52.0 5.33e-01 93.0% 100.0%
4145391 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.63 50.0 5.02e-01 96.5% 88.3%
4602539 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.63 51.0 5.00e-01 100.0% 87.3%
4238582 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.62 49.0 4.91e-01 98.2% 88.3%
4090156 221.1.1.21 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ub-RnfH 0.62 52.0 4.55e-01 98.2% 82.2%
3970838 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.62 52.0 4.71e-01 98.2% 92.5%
4241869 221.1.1.21 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ub-RnfH 0.61 52.0 4.80e-01 98.2% 98.7%
5067362 221.1.1.50 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4430 0.61 51.0 4.34e-01 98.2% 93.2%
4531569 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.61 49.0 4.86e-01 98.2% 90.0%
4938318 221.1.1.14 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS 0.61 51.0 4.95e-01 98.2% 100.0%
3237309 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 51.0 4.33e-01 98.2% 91.3%
3839929 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.61 48.0 4.76e-01 98.2% 85.7%
3716890 221.3.1.0 a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains 0.61 48.0 4.71e-01 98.2% 83.1%
4574961 221.1.1.21 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ub-RnfH 0.61 50.0 4.49e-01 96.5% 83.5%
4157644 221.1.1.21 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ub-RnfH 0.61 51.0 4.47e-01 98.2% 80.0%
3970890 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.60 48.0 4.80e-01 94.7% 88.3%
4156870 221.1.1.4 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.59 50.0 4.31e-01 100.0% 88.4%
3871111 206.1.1.262 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Mad3_BUB1_I 0.58 53.0 3.01e-01 100.0% 12.2%
4952031 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 38.0 3.30e-01 70.2% 93.0%
3462989 80.1.1.1 beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.58 42.0 3.90e-01 91.2% 62.9%
3926235 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 49.0 4.44e-01 98.2% 100.0%
4113663 221.1.1.34 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › YukD 0.57 48.0 4.39e-01 100.0% 93.8%
3403321 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 51.0 3.04e-01 100.0% 27.8%
1382603 5098.1.1.1 a+b two layers › beta-grasp domain in anthrax protective antigen › beta-grasp domain in anthrax protective antigen › beta-grasp domain in anthrax protective antigen › Binary_toxB_3 0.56 47.0 4.01e-01 98.2% 99.0%
3225042 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.54 45.0 4.10e-01 100.0% 83.5%
3228311 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.54 47.0 3.98e-01 100.0% 67.0%
4519278 391.1.2.1 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC 0.53 35.0 2.17e-01 96.5% 10.0%
5054413 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.53 41.0 3.48e-01 87.7% 73.8%
3878508 60.1.1.12 beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Treslin_M 0.52 42.0 3.46e-01 100.0% 79.2%
3939070 11.1.1.1173 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7757 0.52 43.0 3.47e-01 98.2% 94.4%
4587859 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 42.0 4.21e-01 98.2% 98.3%
3731711 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 38.0 2.44e-01 86.0% 47.7%
3166586 3470.1.1.43 extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › PF29527 0.51 38.0 4.02e-01 100.0% 94.0%
4249879 221.1.1.38 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new 0.50 42.0 3.97e-01 96.5% 92.9%