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NC_047736.1__YP_009783660.1__QLX26_gp064__00064

Bact-Vir

NC_047736.1__YP_009783660.1__QLX26_gp064__00064

Identity

Accession:
NC_047736 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-51
PDB
Domain cluster: representative
CATH (95)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.86 67.0 5.42e-01 83.3% 48.2%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.86 78.0 5.85e-01 100.0% 51.4%
2w5yA01 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.85 63.0 4.30e-01 79.2% 24.5%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.85 64.0 5.71e-01 83.3% 59.1%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.81 61.0 5.36e-01 85.4% 54.9%
3tvzB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.81 57.0 4.05e-01 81.2% 26.3%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.80 59.0 5.23e-01 81.2% 56.3%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.79 57.0 4.92e-01 81.2% 50.0%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.77 68.0 5.94e-01 100.0% 75.3%
2f1fA02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.77 55.0 4.61e-01 85.4% 46.2%
4ae5C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.77 55.0 3.82e-01 83.3% 23.4%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.76 67.0 4.43e-01 100.0% 30.9%
4iw7A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.76 57.0 4.32e-01 83.3% 50.4%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 55.0 4.57e-01 81.2% 62.1%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 54.0 4.65e-01 81.2% 63.7%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.73 62.0 5.31e-01 100.0% 69.5%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.73 58.0 5.03e-01 89.6% 66.2%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.73 63.0 4.86e-01 100.0% 59.5%
2wk1A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 61.0 3.91e-01 100.0% 23.1%
4jwoA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.72 61.0 4.47e-01 100.0% 35.5%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 61.0 4.43e-01 100.0% 45.4%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.71 57.0 4.56e-01 89.6% 57.3%
4efjA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 60.0 4.38e-01 100.0% 43.6%
6eibD00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.71 54.0 3.76e-01 83.3% 36.5%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.70 62.0 4.34e-01 97.9% 80.8%
3dnpA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.70 48.0 3.70e-01 72.9% 69.0%
4ritA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.70 53.0 3.47e-01 85.4% 30.7%
1vkwA02 3.40.109.30 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › putative nitroreductase (tm1586), domain 2 0.70 60.0 4.84e-01 100.0% 90.6%
2ijrA01 3.30.70.1270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains 0.70 52.0 4.13e-01 83.3% 40.2%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 54.0 4.51e-01 87.5% 61.4%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.70 62.0 5.31e-01 100.0% 68.0%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 52.0 4.70e-01 85.4% 59.2%
4zevA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.69 61.0 4.68e-01 100.0% 81.3%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.69 58.0 5.24e-01 100.0% 77.1%
2fgcA03 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.69 49.0 4.28e-01 85.4% 48.7%
3ko2A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 57.0 4.07e-01 100.0% 44.1%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 58.0 4.87e-01 100.0% 77.0%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.68 50.0 4.11e-01 83.3% 62.2%
2hf2B02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.68 59.0 4.60e-01 100.0% 82.2%
2hqyA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.68 59.0 4.34e-01 100.0% 42.3%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 57.0 4.58e-01 100.0% 66.0%
1af5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 58.0 4.34e-01 100.0% 50.8%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 56.0 4.09e-01 100.0% 46.3%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.68 51.0 4.30e-01 81.2% 65.1%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.68 50.0 4.08e-01 83.3% 62.9%
4lq0A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 56.0 4.11e-01 100.0% 45.8%
6liuC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 50.0 3.86e-01 83.3% 57.8%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.67 58.0 4.53e-01 100.0% 82.1%
4ofzA03 3.30.70.3080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 55.0 4.60e-01 95.8% 84.3%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.67 51.0 4.48e-01 87.5% 66.2%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.67 58.0 4.25e-01 100.0% 77.9%
1utaA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.67 47.0 4.18e-01 79.2% 50.6%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.66 59.0 4.82e-01 100.0% 82.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.66 53.0 4.82e-01 100.0% 70.7%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.66 57.0 4.51e-01 100.0% 85.1%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 55.0 3.95e-01 100.0% 35.3%
7xinA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 48.0 3.83e-01 83.3% 62.4%
1dcoA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.65 52.0 4.19e-01 91.7% 59.6%
2ab5A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.65 54.0 4.04e-01 100.0% 46.3%
2amyA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.65 54.0 4.34e-01 97.9% 86.3%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 47.0 3.83e-01 81.2% 41.0%
2pcrA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.65 54.0 4.20e-01 100.0% 46.1%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.64 47.0 3.34e-01 81.2% 26.1%
5o5cB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 47.0 3.58e-01 83.3% 47.7%
2pq0A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.63 53.0 4.29e-01 100.0% 91.0%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.43e-01 100.0% 86.4%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.62 49.0 4.46e-01 95.8% 91.5%
4obuA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.62 47.0 3.11e-01 89.6% 29.1%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 45.0 3.62e-01 83.3% 42.7%
8c9vA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 50.0 3.49e-01 100.0% 29.8%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.61 51.0 3.77e-01 97.9% 42.1%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 49.0 3.77e-01 97.9% 93.5%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 43.0 4.07e-01 85.4% 69.1%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 4.21e-01 100.0% 70.9%
2if1A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.60 48.0 3.69e-01 95.8% 43.7%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 48.0 3.31e-01 93.8% 44.4%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.60 42.0 3.80e-01 81.2% 55.8%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 3.96e-01 100.0% 51.9%
1u6mA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 47.0 3.31e-01 97.9% 37.0%
3v8hC00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.58 41.0 2.66e-01 83.3% 13.5%
1nrwA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.58 49.0 3.70e-01 100.0% 93.1%
3mahA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 46.0 4.27e-01 97.9% 67.1%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 3.84e-01 100.0% 60.0%
2pn1A02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.58 45.0 4.18e-01 89.6% 70.3%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 3.95e-01 100.0% 55.9%
2qmaA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 45.0 3.47e-01 97.9% 44.8%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.92e-01 100.0% 71.1%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.57e-01 100.0% 47.9%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 4.17e-01 100.0% 86.2%
2jvrA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 39.0 3.49e-01 81.2% 53.8%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 3.66e-01 100.0% 57.4%
2gumA02 1.20.5.1890 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.53 38.0 3.01e-01 77.1% 94.1%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.53e-01 100.0% 57.4%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 41.0 3.03e-01 100.0% 55.1%
2dgtA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 35.0 3.23e-01 79.2% 52.1%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3387879 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.91 70.0 6.21e-01 83.3% 60.0%
4946891 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.91 70.0 6.04e-01 83.3% 55.7%
5078855 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.91 70.0 5.88e-01 83.3% 52.0%
4976695 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.90 68.0 5.42e-01 83.3% 43.3%
1481304 304.5.1.4 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec 0.90 69.0 6.39e-01 83.3% 67.2%
4999682 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.88 67.0 5.70e-01 83.3% 52.0%
3589710 304.24.1.2 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.87 67.0 5.65e-01 83.3% 52.0%
3838183 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.87 66.0 6.29e-01 81.2% 70.9%
144952 304.5.1.10 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CBD_PlyG 0.86 67.0 5.42e-01 83.3% 48.2%
5620 320.3.1.1 a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 0.86 78.0 5.85e-01 100.0% 51.4%
5028016 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.85 63.0 5.59e-01 81.2% 55.7%
5030922 304.24.1.37 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › MCR_C 0.85 65.0 5.87e-01 85.4% 61.5%
5301 304.24.1.2 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.85 64.0 5.68e-01 83.3% 58.2%
4654074 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.84 66.0 5.24e-01 83.3% 45.6%
5000361 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.84 64.0 5.02e-01 85.4% 41.1%
4090323 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.84 65.0 5.22e-01 85.4% 44.4%
4932631 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.84 65.0 5.00e-01 85.4% 38.8%
3969035 304.24.1.2 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.84 63.0 5.55e-01 81.2% 55.7%
5022354 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.83 76.0 6.43e-01 100.0% 74.7%
5022357 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.83 62.0 5.79e-01 81.2% 66.7%
4332273 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.82 64.0 5.17e-01 85.4% 45.6%
4995776 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 6.31e-01 100.0% 71.4%
1881575 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.81 58.0 4.05e-01 83.3% 24.5%
4023978 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.80 61.0 4.91e-01 83.3% 43.0%
4460221 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.80 61.0 5.02e-01 83.3% 47.1%
5010188 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.78 69.0 6.13e-01 100.0% 74.3%
3989870 304.24.1.2 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.78 59.0 5.07e-01 83.3% 52.0%
3324724 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 57.0 4.13e-01 79.2% 28.1%
3931363 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 57.0 3.91e-01 79.2% 23.2%
5028300 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 69.0 5.72e-01 100.0% 58.8%
3684535 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.78 57.0 3.67e-01 79.2% 17.4%
5010185 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.77 68.0 6.02e-01 100.0% 74.3%
4444873 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.77 67.0 5.16e-01 97.9% 92.4%
5056573 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.76 68.0 4.30e-01 100.0% 21.3%
4228350 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.76 66.0 6.06e-01 100.0% 86.2%
4986894 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.76 69.0 6.38e-01 100.0% 96.7%
4937548 304.54.1.0 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.76 55.0 5.25e-01 85.4% 67.3%
3934530 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.76 56.0 4.56e-01 81.2% 44.4%
3966114 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.75 62.0 5.32e-01 100.0% 64.7%
3815332 304.9.1.84 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 0.74 56.0 4.09e-01 81.2% 35.2%
3250910 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.74 65.0 5.77e-01 100.0% 80.0%
3524888 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.74 55.0 4.90e-01 81.2% 74.3%
3994473 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.74 52.0 3.93e-01 77.1% 29.6%
3962417 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 61.0 3.58e-01 95.8% 11.8%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 61.0 5.26e-01 100.0% 68.8%
4243034 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.71 64.0 3.87e-01 100.0% 34.7%
5082092 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.71 60.0 3.91e-01 97.9% 23.6%
1388654 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.71 60.0 4.21e-01 100.0% 41.5%
3249761 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.71 57.0 4.80e-01 91.7% 89.4%
4519248 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.71 53.0 5.24e-01 81.2% 92.0%
5058294 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.70 52.0 4.71e-01 83.3% 57.1%
4027647 3122.1.1.0 a+b complex topology › MESD › MESD › MESD 0.70 51.0 3.94e-01 79.2% 46.1%
5027723 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.70 57.0 5.24e-01 100.0% 74.3%
3976762 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.70 50.0 4.42e-01 79.2% 53.3%
4952659 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.69 50.0 4.55e-01 81.2% 64.3%
2092599 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.69 58.0 4.22e-01 100.0% 44.2%
5008116 304.24.1.39 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 0.68 51.0 4.17e-01 85.4% 42.1%
3723045 304.51.1.18 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF28298 0.67 49.0 3.98e-01 81.2% 63.3%
3669756 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.67 51.0 4.27e-01 83.3% 55.3%
3721862 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 55.0 4.48e-01 100.0% 63.0%
3990127 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.66 57.0 4.41e-01 100.0% 80.0%
5044658 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.66 47.0 4.04e-01 83.3% 44.7%
4985426 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.66 51.0 4.25e-01 100.0% 46.3%
3946474 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.66 57.0 3.56e-01 100.0% 34.3%
2076029 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.66 57.0 4.49e-01 100.0% 84.3%
4886196 4988.1.1.1 a+b two layers › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain › Ribosomal_S8 0.66 54.0 5.28e-01 100.0% 90.9%
3164638 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.65 56.0 3.52e-01 100.0% 32.7%
3708707 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.65 49.0 3.05e-01 85.4% 23.7%
3804288 2006.1.1.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.65 55.0 3.45e-01 100.0% 21.8%
3539709 101.1.2.838 alpha arrays › HTH › HTH › winged helix domain › PF26117 0.65 48.0 4.25e-01 83.3% 70.7%
4467389 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 54.0 4.29e-01 100.0% 44.5%
3604362 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 54.0 4.80e-01 100.0% 65.3%
5014006 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.65 54.0 4.61e-01 100.0% 77.6%
4182527 2003.1.5.68 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N 0.64 53.0 3.82e-01 100.0% 35.5%
5075866 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 47.0 4.07e-01 85.4% 50.0%
3578641 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.62 48.0 4.31e-01 85.4% 70.0%
5022444 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.62 48.0 4.20e-01 89.6% 62.5%
3810358 3012.1.1.3 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › S6PP 0.62 52.0 4.58e-01 100.0% 82.7%
4965616 304.24.1.39 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 0.61 50.0 3.84e-01 97.9% 39.2%
4997133 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.61 49.0 4.04e-01 95.8% 57.9%
3981390 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 49.0 4.31e-01 100.0% 83.7%
3941592 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 49.0 3.92e-01 97.9% 95.5%
4864419 2002.1.1.152 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 0.59 50.0 2.96e-01 100.0% 27.3%
5027292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 3.33e-01 100.0% 23.9%
4034313 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.58 50.0 3.90e-01 100.0% 90.9%
3879988 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.58 48.0 3.22e-01 100.0% 93.0%
3781882 2486.1.1.3 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.57 48.0 3.05e-01 100.0% 82.7%
4022855 304.117.1.5 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › PF28298 0.57 42.0 3.62e-01 81.2% 54.1%
4550027 304.60.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 0.56 45.0 3.19e-01 97.9% 46.8%
4948712 2002.1.1.152 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 0.55 46.0 2.69e-01 100.0% 45.8%
3938079 390.1.1.1 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.51 35.0 3.08e-01 81.2% 42.2%