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NC_047736.1__YP_009783786.1__QLX26_gp190__00190

Bact-Vir

NC_047736.1__YP_009783786.1__QLX26_gp190__00190

Identity

Accession:
NC_047736 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bequatrovirus› Bacillus_phage_B5S

TaxID: 1126949

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-91
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 64.0 6.83e-01 100.0% 90.6%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 59.0 5.99e-01 100.0% 86.4%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 55.0 5.72e-01 96.7% 87.7%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.72 50.0 4.58e-01 90.2% 55.0%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 5.59e-01 96.7% 98.0%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.49e-01 96.7% 87.9%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.65 58.0 5.39e-01 100.0% 84.2%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.64 57.0 4.42e-01 98.4% 60.2%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 52.0 3.93e-01 100.0% 56.8%
3m4uB00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 43.0 2.82e-01 78.7% 32.5%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 3.91e-01 100.0% 55.9%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 49.0 4.08e-01 98.4% 76.3%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 46.0 3.14e-01 95.1% 36.3%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 38.0 2.97e-01 88.5% 28.9%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.70e-01 100.0% 77.0%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 48.0 3.71e-01 100.0% 54.2%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.55 44.0 3.11e-01 90.2% 93.9%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.54 47.0 3.71e-01 100.0% 57.6%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.54 45.0 3.58e-01 100.0% 90.1%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 46.0 3.75e-01 100.0% 97.6%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.22e-01 100.0% 61.6%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 37.0 2.73e-01 77.0% 64.0%
5w3xD01 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.53 39.0 3.85e-01 88.5% 75.4%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 45.0 3.70e-01 100.0% 52.6%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 41.0 3.39e-01 91.8% 87.6%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.17e-01 100.0% 47.8%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 38.0 2.62e-01 83.6% 30.9%
1sbkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 41.0 3.26e-01 91.8% 72.3%
3s4kA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 39.0 3.27e-01 91.8% 84.7%
5tkyA04 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.50 39.0 3.34e-01 91.8% 70.7%
1uurA04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 44.0 3.46e-01 100.0% 51.1%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 41.0 3.17e-01 96.7% 76.9%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.50 38.0 2.69e-01 91.8% 41.0%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.90 72.0 6.80e-01 100.0% 72.9%
3926118 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.90 71.0 7.23e-01 100.0% 85.0%
3591607 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.78 68.0 4.49e-01 100.0% 24.1%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 63.0 6.22e-01 100.0% 81.5%
3703970 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 5.76e-01 100.0% 58.1%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.77 62.0 6.12e-01 100.0% 81.5%
3942573 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 56.0 5.76e-01 96.7% 86.2%
4027263 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.72 56.0 4.42e-01 96.7% 42.5%
3411042 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 61.0 6.16e-01 95.1% 95.0%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.76e-01 96.7% 85.9%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.43e-01 96.7% 81.7%
3482225 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.71 54.0 4.23e-01 96.7% 38.5%
4250478 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.70 58.0 4.47e-01 90.2% 49.2%
4163661 4.1.1.446 ↗ beta barrels › SH3 › SH3 › SH3 › PF30222 0.68 54.0 5.25e-01 100.0% 77.9%
5042986 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.26e-01 100.0% 88.3%
3390503 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.67 48.0 4.72e-01 95.1% 70.8%
3207081 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 55.0 5.49e-01 96.7% 93.8%
3786518 4.8.1.18 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.65 55.0 5.38e-01 100.0% 87.7%
3625263 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.70e-01 98.4% 63.0%
5027711 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.63 53.0 4.01e-01 91.8% 89.9%
4123449 4.8.1.35 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.63 53.0 4.83e-01 96.7% 69.4%
4537528 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.30e-01 98.4% 87.1%
5013054 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.62 44.0 2.92e-01 75.4% 81.2%
3678872 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.62 54.0 5.06e-01 96.7% 85.3%
3590849 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.62 51.0 3.88e-01 91.8% 86.2%
3796536 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.62 50.0 4.59e-01 95.1% 68.8%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 53.0 4.14e-01 98.4% 86.7%
3991019 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.61 47.0 4.61e-01 91.8% 78.5%
3989353 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.61 52.0 4.15e-01 96.7% 98.4%
4977797 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.61 53.0 4.06e-01 96.7% 90.7%
3636503 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 53.0 5.04e-01 100.0% 84.3%
3675653 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.60 52.0 4.90e-01 96.7% 81.3%
3166879 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 49.0 4.84e-01 100.0% 89.2%
3339162 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.60 52.0 4.12e-01 98.4% 48.5%
3782999 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.60 50.0 3.95e-01 100.0% 47.6%
3684460 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.59 53.0 4.57e-01 100.0% 83.2%
4882197 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.59 51.0 4.19e-01 100.0% 55.1%
1807154 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 51.0 3.91e-01 100.0% 54.7%
4406339 2003.1.2.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.59 50.0 3.65e-01 100.0% 95.1%
3627678 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.59 51.0 4.14e-01 100.0% 87.5%
3974499 2487.1.1.3 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Aconitase_C 0.58 47.0 3.20e-01 93.4% 80.4%
3392590 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 48.0 4.86e-01 91.8% 100.0%
3931715 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 51.0 4.36e-01 100.0% 94.0%
3960836 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.58 42.0 2.97e-01 77.0% 39.0%
5039871 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.58 48.0 3.26e-01 98.4% 47.7%
3200925 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.58 46.0 2.89e-01 93.4% 69.7%
5063379 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.57 45.0 3.37e-01 93.4% 43.3%
3575208 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.57 47.0 3.73e-01 93.4% 64.3%
3991018 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.56 47.0 4.35e-01 95.1% 81.2%
3341617 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.56 49.0 3.29e-01 100.0% 29.2%
3974649 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.56 45.0 4.07e-01 93.4% 85.6%
4511710 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.56 46.0 3.21e-01 91.8% 60.9%
3438374 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 47.0 2.90e-01 95.1% 31.1%
4079492 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.56 45.0 3.25e-01 91.8% 57.4%
3618804 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.54 46.0 4.14e-01 95.1% 72.9%
3315971 708.1.1.2 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY 0.53 36.0 3.12e-01 77.0% 41.0%
3589829 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.53 45.0 3.89e-01 100.0% 74.3%
3695678 3924.1.1.0 ↗ alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.52 43.0 2.64e-01 96.7% 23.0%
3374363 222.1.1.3 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_CoA_thio 0.52 41.0 3.05e-01 91.8% 58.9%
4014654 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.51 40.0 3.20e-01 90.2% 91.4%
5043037 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.51 45.0 3.84e-01 100.0% 77.0%
3577440 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.50 42.0 3.56e-01 100.0% 65.2%
3739857 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.50 40.0 3.30e-01 98.4% 47.0%