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NC_047744.1__YP_009784505.1__QLX39_gp143__00204

Bact-Vir

NC_047744.1__YP_009784505.1__QLX39_gp143__00204

Identity

Accession:
NC_047744 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Agatevirus› Bacillus_phage_Bp8p-T

TaxID: 1445811

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-73
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.72 61.0 5.66e-01 92.5% 91.6%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.69 57.0 5.34e-01 92.5% 90.5%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 57.0 5.23e-01 94.0% 89.5%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 54.0 5.21e-01 91.0% 97.4%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 5.27e-01 89.6% 93.9%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.25e-01 89.6% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.62 43.0 4.78e-01 82.1% 94.2%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 5.17e-01 88.1% 96.6%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 5.21e-01 89.6% 98.4%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 45.0 4.69e-01 88.1% 85.7%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 47.0 4.60e-01 83.6% 100.0%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.60e-01 86.6% 89.3%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 50.0 4.18e-01 94.0% 73.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.87e-01 95.5% 83.6%
3g1pA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.60 42.0 2.83e-01 73.1% 26.9%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 43.0 4.72e-01 77.6% 100.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.89e-01 79.1% 100.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.73e-01 80.6% 100.0%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 49.0 4.06e-01 94.0% 52.8%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 5.09e-01 94.0% 100.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.63e-01 83.6% 88.9%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.85e-01 83.6% 100.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.64e-01 89.6% 92.8%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 47.0 4.31e-01 92.5% 79.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.58 39.0 4.30e-01 80.6% 97.9%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 4.62e-01 89.6% 92.3%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 48.0 4.53e-01 91.0% 85.2%
5yhhA00 2.40.33.20 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.57 48.0 3.46e-01 92.5% 75.9%
2i7tA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 40.0 2.71e-01 73.1% 30.4%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.83e-01 100.0% 87.0%
4cp6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 39.0 2.40e-01 71.6% 14.6%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 41.0 2.75e-01 77.6% 41.2%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.57 43.0 3.59e-01 85.1% 72.9%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 40.0 2.70e-01 76.1% 33.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 38.0 4.35e-01 70.1% 100.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 42.0 4.25e-01 80.6% 92.5%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 39.0 2.62e-01 76.1% 33.0%
1o67C00 2.40.33.20 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.55 46.0 3.27e-01 94.0% 70.0%
4c47A01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.54 41.0 3.52e-01 86.6% 91.0%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.54 35.0 3.78e-01 74.6% 83.3%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.53 38.0 3.37e-01 77.6% 65.7%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 37.0 3.07e-01 74.6% 72.2%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.19e-01 80.6% 60.9%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 36.0 3.89e-01 73.1% 100.0%
3wa1A01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 39.0 3.15e-01 89.6% 98.8%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 39.0 2.48e-01 86.6% 83.5%
1nunA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 39.0 3.14e-01 85.1% 92.8%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 57.0 6.20e-01 88.1% 96.4%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 53.0 5.99e-01 83.6% 100.0%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.99e-01 89.6% 96.4%
4972485 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 6.01e-01 86.6% 100.0%
4975478 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.72 59.0 5.48e-01 89.6% 96.5%
5049033 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.71 59.0 5.68e-01 89.6% 98.7%
4930563 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.71 57.0 5.70e-01 88.1% 98.6%
5040422 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.71 57.0 5.50e-01 86.6% 97.3%
5079888 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 59.0 5.63e-01 91.0% 96.2%
5072519 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 57.0 5.53e-01 88.1% 98.7%
5042313 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 59.0 5.70e-01 91.0% 97.3%
4952214 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 57.0 5.50e-01 88.1% 97.3%
3386779 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 58.0 5.60e-01 89.6% 100.0%
5027286 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.70 60.0 5.51e-01 94.0% 90.6%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.45e-01 89.6% 92.7%
4033110 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 56.0 5.44e-01 88.1% 98.7%
3839852 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 56.0 5.47e-01 89.6% 100.0%
4984041 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 56.0 5.38e-01 88.1% 97.3%
5055435 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 53.0 5.30e-01 83.6% 100.0%
5030535 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.68 57.0 5.54e-01 92.5% 100.0%
4118011 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.68 57.0 5.29e-01 94.0% 97.6%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.68e-01 85.1% 100.0%
5001481 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 54.0 5.28e-01 89.6% 97.3%
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.67 55.0 5.61e-01 94.0% 93.8%
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 47.0 5.10e-01 89.6% 92.7%
4077367 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 53.0 5.44e-01 91.0% 100.0%
3590827 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 55.0 5.65e-01 94.0% 98.5%
3702177 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.83e-01 95.5% 98.0%
142633 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 52.0 5.27e-01 89.6% 93.9%
3878271 101.1.2.284 ↗ alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.64 51.0 3.84e-01 88.1% 36.8%
3274582 4.1.1.365 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.64 49.0 5.30e-01 91.0% 100.0%
4061621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 3.89e-01 95.5% 33.8%
3590911 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 45.0 4.47e-01 82.1% 71.4%
4146937 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 53.0 5.40e-01 94.0% 98.5%
3237859 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 48.0 5.25e-01 85.1% 100.0%
3854862 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 51.0 4.62e-01 100.0% 64.2%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 52.0 5.30e-01 89.6% 95.4%
4033299 4.1.1.375 ↗ beta barrels › SH3 › SH3 › SH3 › PF28472 0.63 42.0 3.84e-01 80.6% 49.5%
3218349 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 53.0 4.78e-01 100.0% 67.4%
3795223 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 47.0 4.37e-01 89.6% 63.5%
3579591 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.63 48.0 5.19e-01 83.6% 100.0%
4010317 4.1.1.395 ↗ beta barrels › SH3 › SH3 › SH3 › PF27398 0.62 49.0 5.00e-01 100.0% 92.3%
4038269 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 50.0 5.12e-01 91.0% 96.9%
3609116 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.39e-01 97.0% 100.0%
1685099 1.1.7.51 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NeqB_N 0.62 43.0 4.59e-01 98.5% 84.7%
5042892 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.61 50.0 5.23e-01 91.0% 100.0%
3597690 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 5.29e-01 98.5% 95.7%
3440094 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.61 49.0 5.18e-01 92.5% 100.0%
3259547 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.24e-01 92.5% 81.7%
3672445 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 3.99e-01 95.5% 93.1%
4059465 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.60 49.0 4.93e-01 91.0% 88.2%
5011920 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.57e-01 88.1% 100.0%
3914746 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.60 44.0 4.41e-01 88.1% 77.1%
4064354 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.60 47.0 4.94e-01 88.1% 96.7%
5043521 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.60 45.0 3.70e-01 83.6% 65.2%
3222146 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.60 48.0 4.88e-01 91.0% 92.3%
3525406 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.60 49.0 4.16e-01 95.5% 54.5%
4002679 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.60 50.0 4.18e-01 94.0% 100.0%
4104915 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.59 47.0 4.94e-01 92.5% 98.3%
3199259 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.59 47.0 4.79e-01 88.1% 89.2%
25836 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 47.0 4.67e-01 89.6% 94.4%
3997949 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 51.0 4.68e-01 100.0% 74.4%
4941936 4.1.1.493 ↗ beta barrels › SH3 › SH3 › SH3 › PF29241 0.58 45.0 4.08e-01 85.1% 84.2%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.58 49.0 4.77e-01 95.5% 84.0%
3190835 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.58 46.0 4.30e-01 88.1% 69.4%
3505437 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 4.28e-01 88.1% 82.4%
3763497 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 45.0 4.41e-01 86.6% 96.0%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.57 50.0 3.78e-01 100.0% 40.0%
3756428 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.57 49.0 4.37e-01 100.0% 87.0%
91 1.1.15.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › MOSC,YiiM_3-alpha 0.55 47.0 3.26e-01 94.0% 69.3%
4950506 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 38.0 3.26e-01 71.6% 56.2%
5008718 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.54 44.0 2.70e-01 92.5% 95.9%
3180421 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.54 37.0 3.71e-01 91.0% 68.6%
3962889 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 43.0 3.79e-01 91.0% 82.0%
5028142 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 40.0 2.57e-01 83.6% 47.1%
3746407 5.1.5.64 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 0.52 38.0 2.39e-01 82.1% 33.1%
4367085 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 38.0 3.59e-01 80.6% 72.9%
3759214 10.32.1.1 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B 0.51 42.0 3.17e-01 94.0% 50.3%
4029617 5.1.11.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 0.51 40.0 2.51e-01 92.5% 92.0%