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NC_047750.1__YP_009785006.1__HOR01_gp21__00021

Bact-Vir

NC_047750.1__YP_009785006.1__HOR01_gp21__00021

Identity

Accession:
NC_047750 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-129
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12571.14 best Phage_tail_fib 150.2 6.00e-44 100.0% 80.7%
D2 high residues 164-278
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27114.1 best Phage_tail_beta 97.3 7.40e-28 57.4% 98.5%
D3 high residues 414-493
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12195.15 best End_beta_barrel 77.3 1.00e-21 96.2% 81.9%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.97 92.0 8.99e-01 98.8% 98.8%
2v31A01 2.40.30.180 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain 0.72 65.0 6.11e-01 100.0% 83.5%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.69 63.0 5.91e-01 100.0% 97.9%
2m5sA00 2.40.30.240 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.69 62.0 5.35e-01 100.0% 96.8%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.69 54.0 5.26e-01 100.0% 75.6%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.68 59.0 5.66e-01 97.5% 97.8%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 60.0 5.73e-01 100.0% 98.9%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 57.0 5.86e-01 100.0% 100.0%
2eqnA01 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.67 58.0 5.71e-01 96.2% 90.8%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 57.0 5.77e-01 98.8% 100.0%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 57.0 5.39e-01 100.0% 91.8%
5zl6A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.64 57.0 4.65e-01 100.0% 66.9%
4lusB01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.64 57.0 4.67e-01 100.0% 69.1%
4xotA03 2.40.30.250 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 57.0 5.64e-01 100.0% 93.0%
7syvx01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 56.0 4.74e-01 100.0% 72.3%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.64 56.0 5.43e-01 97.5% 100.0%
3zugB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.63 54.0 4.58e-01 100.0% 88.7%
1vwxf00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.63 54.0 4.97e-01 100.0% 96.3%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.62 52.0 5.02e-01 91.3% 100.0%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 55.0 4.64e-01 100.0% 85.4%
4v15A01 2.40.37.20 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain 0.62 51.0 4.26e-01 98.8% 51.4%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.62 54.0 4.88e-01 100.0% 73.9%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 43.0 3.85e-01 73.8% 99.1%
2kc5A01 3.30.1460.40 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › [NiFe]-hydrogenase assembly chaperone, HybE 0.60 47.0 4.01e-01 86.3% 64.7%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 49.0 4.85e-01 96.2% 90.8%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 50.0 4.71e-01 96.2% 85.6%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 50.0 5.06e-01 100.0% 100.0%
4fkeA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.58 49.0 3.61e-01 98.8% 34.5%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.57 47.0 4.09e-01 98.8% 76.8%
1n08A00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.57 48.0 4.02e-01 100.0% 64.3%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 46.0 4.39e-01 90.0% 76.0%
3hwuA00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.55 48.0 4.02e-01 100.0% 77.8%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.55 43.0 2.72e-01 97.5% 13.9%
6r2wH02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 41.0 3.78e-01 82.5% 80.9%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.54 46.0 4.04e-01 100.0% 82.6%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 44.0 4.02e-01 100.0% 67.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 4.00e-01 97.5% 87.5%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.17e-01 98.8% 85.5%
3nngA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 44.0 3.72e-01 98.8% 93.5%
3qnfC01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.52 42.0 3.27e-01 97.5% 36.1%
4k22A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.52 39.0 3.57e-01 81.2% 65.7%
3h0gH00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 32.0 2.85e-01 100.0% 40.3%
1imhC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 4.13e-01 97.5% 82.1%
4wz9A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.52 42.0 3.25e-01 97.5% 36.9%
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.51 41.0 3.34e-01 100.0% 43.9%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 44.0 3.81e-01 100.0% 98.5%
5z06B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 4.01e-01 96.2% 79.3%
1d5rA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.47e-01 88.7% 52.6%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.86e-01 98.8% 73.8%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 41.0 3.98e-01 100.0% 79.8%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 4.08e-01 100.0% 86.7%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 41.0 3.48e-01 97.5% 52.1%
5axgA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 43.0 3.73e-01 96.2% 100.0%
2cn3A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 38.0 2.63e-01 83.7% 98.7%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.50 42.0 3.31e-01 98.8% 71.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1030933 1.1.7.29 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel 0.97 93.0 8.93e-01 100.0% 95.5%
4028468 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.73 66.0 6.01e-01 100.0% 76.2%
5079674 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.73 60.0 6.19e-01 96.2% 94.7%
3789503 1.1.7.24 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.72 64.0 5.89e-01 100.0% 98.1%
4173804 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 62.0 5.96e-01 97.5% 96.7%
4510320 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.69 61.0 5.84e-01 96.2% 95.6%
3387360 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 58.0 5.74e-01 100.0% 87.1%
4026674 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.67 59.0 5.93e-01 100.0% 96.2%
3596642 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 58.0 5.74e-01 100.0% 90.6%
2556060 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 57.0 5.83e-01 100.0% 98.7%
4943639 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 58.0 5.75e-01 100.0% 100.0%
4319764 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.65 56.0 5.04e-01 100.0% 68.2%
3953578 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.65 57.0 4.88e-01 98.8% 80.8%
4026390 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 58.0 4.87e-01 100.0% 59.3%
3575535 1.1.7.113 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 0.65 56.0 3.53e-01 100.0% 19.6%
4289955 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.64 56.0 5.02e-01 98.8% 82.6%
2161972 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 56.0 5.53e-01 100.0% 92.8%
4854964 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 56.0 5.53e-01 100.0% 91.9%
4496370 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.64 55.0 4.79e-01 97.5% 73.6%
4429352 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 57.0 5.52e-01 100.0% 88.9%
4627066 1.1.7.44 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift 0.63 55.0 4.97e-01 100.0% 79.1%
3680769 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 55.0 4.78e-01 100.0% 90.8%
4209527 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.63 52.0 4.76e-01 93.8% 80.9%
3268887 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 55.0 5.17e-01 100.0% 93.0%
3689991 1.1.7.44 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift 0.61 54.0 4.71e-01 100.0% 81.3%
4943168 1.1.7.144 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 0.61 52.0 4.94e-01 95.0% 86.3%
127 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.60 51.0 4.69e-01 100.0% 72.5%
4519252 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.59 51.0 4.57e-01 98.8% 73.9%
3933470 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.59 50.0 3.71e-01 98.8% 35.3%
3392702 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.59 49.0 3.67e-01 98.8% 35.3%
3502290 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 40.0 4.53e-01 72.5% 95.0%
1851176 5092.1.1.0 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins 0.58 49.0 4.25e-01 100.0% 76.5%
3273204 11.1.1.802 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.58 50.0 4.75e-01 96.2% 81.1%
1878750 11.1.1.171 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 0.58 49.0 4.69e-01 97.5% 81.4%
3251949 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.61e-01 88.7% 83.5%
3520927 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.57 46.0 3.43e-01 97.5% 33.2%
4229219 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.57 43.0 4.11e-01 82.5% 81.1%
2814163 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.57 45.0 3.42e-01 97.5% 33.2%
3942563 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 49.0 4.59e-01 100.0% 100.0%
3822637 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 48.0 4.56e-01 97.5% 83.2%
184925 11.21.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › Tailspike_C 0.56 44.0 4.62e-01 97.5% 98.6%
3250649 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.45e-01 97.5% 77.1%
4660084 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 42.0 4.50e-01 100.0% 97.1%
3472007 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 47.0 3.94e-01 100.0% 59.3%
4127135 10.32.1.12 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.54 47.0 3.85e-01 100.0% 89.0%
3699284 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 44.0 3.29e-01 97.5% 41.2%
3677761 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.53 45.0 4.00e-01 98.8% 84.8%
3263949 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 47.0 4.49e-01 100.0% 83.2%
5053832 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.53 46.0 3.53e-01 98.8% 41.5%
3248954 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.29e-01 97.5% 82.1%
3217257 11.1.1.955 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th 0.53 45.0 4.26e-01 100.0% 85.0%
3269635 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 46.0 4.29e-01 98.8% 87.0%
1558582 5092.1.1.6 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fiber_head_BAdV-4 0.52 43.0 3.96e-01 98.8% 74.8%
4004318 4182.1.1.3 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.52 42.0 3.80e-01 95.0% 62.5%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 34.0 3.58e-01 100.0% 75.7%
3509763 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.52 40.0 3.26e-01 82.5% 56.0%
3783233 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.51 42.0 3.27e-01 93.8% 94.9%
3172397 11.1.1.207 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › AMPK1_CBM 0.51 38.0 3.65e-01 81.2% 69.5%
3841963 11.2.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.51 40.0 3.21e-01 88.7% 40.0%
4020405 10.32.1.17 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase 0.51 42.0 3.34e-01 97.5% 85.8%
4265804 11.1.5.89 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF3707 0.50 42.0 3.48e-01 100.0% 88.5%
3910384 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 43.0 4.14e-01 97.5% 85.3%
D4 high residues 909-1002
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a0tA03 2.60.320.30 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › 0.72 58.0 5.93e-01 100.0% 91.1%
1cauA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 41.0 3.28e-01 100.0% 31.5%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.66 35.0 3.93e-01 100.0% 65.8%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 41.0 3.62e-01 100.0% 43.5%
1wzaA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 39.0 4.25e-01 98.9% 74.7%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.62 41.0 4.04e-01 88.3% 62.1%
2biiA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 46.0 3.80e-01 79.8% 79.9%
1mzkA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.61 46.0 4.23e-01 79.8% 97.5%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 53.0 5.07e-01 100.0% 83.0%
8shiI01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 48.0 4.70e-01 92.6% 77.9%
4npjB01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.60 45.0 3.92e-01 78.7% 61.4%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 40.0 4.31e-01 100.0% 82.3%
7a1rA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.60 43.0 4.08e-01 77.7% 99.2%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.59 47.0 4.27e-01 87.2% 96.2%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.70e-01 100.0% 80.6%
2jqjA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 43.0 3.93e-01 78.7% 83.1%
5swsE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.80e-01 98.9% 82.9%
6hmjA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 44.0 4.27e-01 80.9% 96.2%
1bd2E01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 4.69e-01 98.9% 81.4%
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.57 37.0 4.08e-01 100.0% 84.9%
5f7uA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 52.0 4.70e-01 100.0% 99.2%
1n6uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.29e-01 100.0% 75.5%
3qjhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 38.0 3.70e-01 70.2% 97.2%
3lb6C01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 38.0 3.90e-01 100.0% 73.9%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.55 48.0 3.88e-01 100.0% 49.2%
4l1dC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.50e-01 96.8% 82.6%
3zx7A01 2.60.120.980 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.09e-01 100.0% 89.9%
5irbA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.90e-01 76.6% 90.4%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.54 37.0 3.74e-01 100.0% 71.4%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.54 42.0 3.76e-01 100.0% 57.4%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.17e-01 100.0% 77.5%
2k5gA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 45.0 3.70e-01 92.6% 83.3%
1x53A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.99e-01 90.4% 93.9%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 4.18e-01 89.4% 89.6%
3muuB02 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.54 35.0 3.85e-01 100.0% 86.3%
3nhqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 40.0 3.67e-01 77.7% 72.3%
4dmiA02 2.60.120.1010 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.17e-01 100.0% 78.8%
3q8pB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 47.0 4.54e-01 100.0% 97.2%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 4.40e-01 100.0% 88.3%
4hh2C04 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 40.0 3.70e-01 79.8% 85.5%
4kqdB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 40.0 3.76e-01 80.9% 82.8%
3fg8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 39.0 3.82e-01 79.8% 88.7%
3rwnB00 2.60.120.1120 Mainly Beta › Sandwich › Jelly Rolls › Sf6-type phage tail needle knob 0.52 46.0 3.97e-01 100.0% 90.3%
4iedA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 39.0 2.97e-01 80.9% 82.6%
1yq5A00 2.60.120.670 Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. 0.52 46.0 4.01e-01 100.0% 97.9%
3akoC00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 39.0 3.45e-01 84.0% 75.8%
7uwjC02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.50 39.0 3.88e-01 100.0% 81.4%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033340 3386.1.1.0 beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related 0.72 66.0 6.17e-01 100.0% 98.2%
4955273 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.68 42.0 3.71e-01 100.0% 41.4%
3528111 10.21.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.67 52.0 4.80e-01 100.0% 63.2%
4956474 284.1.1.9 a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.66 46.0 5.16e-01 96.8% 95.7%
5021820 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 53.0 4.05e-01 91.5% 57.3%
4140787 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.63 47.0 4.27e-01 78.7% 71.2%
3799718 11.2.1.25 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PL48 0.62 47.0 3.48e-01 79.8% 35.6%
3547860 10.21.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.60 49.0 4.40e-01 100.0% 63.8%
3885395 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 41.0 4.31e-01 98.9% 78.8%
3887026 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 40.0 4.17e-01 100.0% 75.3%
5035793 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 38.0 4.25e-01 88.3% 87.1%
4402757 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.59 41.0 3.60e-01 100.0% 48.9%
5061425 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 37.0 4.00e-01 87.2% 78.7%
3224512 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.89e-01 95.7% 88.3%
3700521 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 4.13e-01 96.8% 80.0%
997811 11.1.1.19 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_E2_glycop 0.56 37.0 4.08e-01 100.0% 84.9%
3438338 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.56 41.0 4.55e-01 94.7% 97.3%
3860932 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.56 46.0 4.46e-01 100.0% 80.0%
3773868 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 49.0 4.69e-01 98.9% 84.5%
4008396 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 42.0 4.26e-01 100.0% 81.1%
4942977 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 37.0 3.42e-01 70.2% 83.2%
3652547 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.54 44.0 4.30e-01 100.0% 82.0%
5062504 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 34.0 3.68e-01 87.2% 78.7%
5042048 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.54 48.0 3.76e-01 100.0% 95.1%
3488754 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.89e-01 90.4% 81.5%
3171918 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 39.0 3.56e-01 79.8% 82.4%
5063919 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.52 39.0 3.65e-01 80.9% 77.5%
4240242 10.32.1.75 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH101_dom-5 0.52 46.0 4.00e-01 98.9% 95.9%
3868845 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.52 46.0 4.28e-01 100.0% 79.2%
3565284 223.2.1.21 a+b three layers › Profilin-like › profilin-like › profilin-like › AP-5_subunit_s1 0.52 39.0 3.14e-01 81.9% 64.5%
4031371 264.2.1.1 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.52 39.0 3.41e-01 79.8% 92.9%
3332356 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 45.0 3.18e-01 100.0% 43.5%
4175825 387.1.1.0 few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.51 29.0 3.45e-01 81.9% 83.1%
3234328 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 39.0 3.78e-01 81.9% 86.7%
3960510 3844.2.1.0 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone 0.50 41.0 3.01e-01 92.6% 63.2%
3427374 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 45.0 4.09e-01 100.0% 92.8%
D5 medium residues 279-318_629-644_656-722_739-771
PDB
D6 medium residues 772-789_829-876
PDB