NC_047777.1__YP_009787258.1__HOR28_gp02__00002

Bact-Vir

Identity

Accession:: NC_047777 ↗
Kingdom:: phage

Quality

88.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Kayfunavirus› Escherichia_phage_ZG49

TaxID: 1897641

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-93

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3p9dE01	1.10.560.10	Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain	0.69	51.0	3.70e-01	78.5%	50.6%
3kkbA00	1.20.120.880	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain	0.63	54.0	4.82e-01	98.9%	67.5%
3vkgB03	1.20.58.1120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4	0.62	46.0	3.92e-01	79.6%	84.6%
2c0gA02	1.20.1150.12	Mainly Alpha › Up-down Bundle › Endoplasmic reticulum protein erp29 › Endoplasmic reticulum resident protein 29, C-terminal domain	0.61	52.0	5.02e-01	92.5%	97.2%
6k6iA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.60	48.0	3.60e-01	83.9%	86.3%
3cskA02	3.30.540.30	Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 ›	0.60	45.0	3.71e-01	78.5%	85.2%
1orjD00	1.20.120.340	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS	0.59	44.0	4.06e-01	80.6%	76.0%
3hlzA02	1.20.120.1090	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.57	40.0	3.60e-01	72.0%	91.5%
3fseB02	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.56	48.0	4.06e-01	90.3%	93.1%
7tj4A01	1.25.40.1040	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.55	41.0	3.76e-01	81.7%	60.0%
3snxA00	1.25.40.390	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.55	48.0	3.12e-01	100.0%	64.2%
1f5mA00	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.54	43.0	3.57e-01	89.2%	71.6%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4590767	219.1.1.3 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH	0.80	46.0	2.94e-01	71.0%	13.2%
3976663	3812.1.1.1 ↗	alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E	0.77	42.0	5.05e-01	77.4%	78.5%
3726576	192.6.1.0 ↗	alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain	0.77	45.0	4.95e-01	71.0%	72.0%
5000553	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.65	47.0	5.36e-01	89.2%	100.0%
3815191	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.64	53.0	4.37e-01	87.1%	85.4%
3510771	610.4.1.0 ↗	alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain	0.63	51.0	5.00e-01	96.8%	79.0%
3636524	192.4.1.13 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Cactin_mid	0.63	48.0	3.58e-01	79.6%	81.4%
3558834	604.12.1.6 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › NRBF2_MIT	0.60	46.0	4.72e-01	91.4%	82.2%
3638713	2003.1.2.0 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain	0.54	44.0	2.77e-01	87.1%	32.8%