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NC_047794.1__YP_009788213.1__HOR45_gp10__00010

Bact-Vir

NC_047794.1__YP_009788213.1__HOR45_gp10__00010

Identity

Accession:
NC_047794 ↗
Kingdom:
phage

Quality

92.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Picardvirus› Streptomyces_phage_Picard

TaxID: 1920311

Cluster

View cluster (247 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-93
PDB
Domain cluster: rep: OR234010.1__WNV46927.1__LPLmcIH19_0010__00010__D13-114
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 47.0 4.48e-01 94.4% 67.0%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 35.0 3.60e-01 98.9% 58.0%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 50.0 4.48e-01 92.1% 87.0%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 34.0 3.36e-01 96.6% 55.8%
4tw1B00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.55 38.0 2.70e-01 70.8% 76.2%
2wanA01 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.55 38.0 3.81e-01 91.0% 69.5%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 26.0 3.39e-01 89.9% 83.0%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 36.0 2.52e-01 98.9% 21.8%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.81e-01 94.4% 71.3%
1nf3C00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 38.0 3.55e-01 82.0% 89.4%
3wp4A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 37.0 2.85e-01 79.8% 89.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3393658 11.1.1.822 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 0.64 44.0 4.30e-01 89.9% 64.0%
3507058 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 42.0 4.32e-01 89.9% 75.3%
5007926 210.1.2.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase 0.60 46.0 2.72e-01 82.0% 93.6%
3408263 11.1.1.822 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 0.59 41.0 4.08e-01 87.6% 68.4%
4156749 3234.1.1.2 ↗ a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.56 40.0 2.87e-01 82.0% 24.2%
215919 2484.1.1.19 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1,Tnp_DNA_bind 0.53 41.0 2.72e-01 87.6% 89.6%
3227297 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.52 39.0 3.44e-01 89.9% 53.8%
3901826 5.1.4.78 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.51 43.0 2.75e-01 98.9% 55.2%
3549354 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 2.76e-01 100.0% 53.6%
5067731 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 39.0 3.86e-01 88.8% 76.8%
4927566 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.50 34.0 3.40e-01 89.9% 67.8%