←Back to structures
NC_047794.1__YP_009788232.1__HOR45_gp29__00029
Bact-VirNC_047794.1__YP_009788232.1__HOR45_gp29__00029
Identity
- Accession:
- NC_047794 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
TaxID: 1920311
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-116
Domain cluster:
rep: KT001914.1__AKU43589.1__CPT_Seuss63__00063__D46-140
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.85 | 77.0 | 7.04e-01 | 100.0% | 76.4% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.78 | 72.0 | 5.78e-01 | 100.0% | 61.0% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.78 | 44.0 | 4.28e-01 | 100.0% | 51.6% |
| 1xneA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.78 | 69.0 | 6.28e-01 | 100.0% | 73.5% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.74 | 67.0 | 5.68e-01 | 100.0% | 64.7% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.71 | 43.0 | 4.23e-01 | 100.0% | 55.9% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.70 | 44.0 | 3.47e-01 | 98.8% | 32.5% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.70 | 43.0 | 4.03e-01 | 100.0% | 50.5% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.69 | 44.0 | 4.18e-01 | 100.0% | 53.8% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.69 | 37.0 | 3.11e-01 | 95.3% | 31.0% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 34.0 | 3.90e-01 | 97.7% | 65.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 40.0 | 4.36e-01 | 96.5% | 70.8% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 36.0 | 3.72e-01 | 93.0% | 56.2% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 33.0 | 3.87e-01 | 93.0% | 66.1% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 40.0 | 4.34e-01 | 98.8% | 73.6% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.65 | 51.0 | 4.30e-01 | 100.0% | 51.1% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 30.0 | 3.41e-01 | 91.9% | 57.4% |
| 1havB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 42.0 | 3.98e-01 | 96.5% | 61.2% |
| 3meuB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 33.0 | 3.52e-01 | 97.7% | 63.5% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 41.0 | 3.82e-01 | 100.0% | 57.9% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 51.0 | 4.42e-01 | 100.0% | 61.3% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 26.0 | 2.95e-01 | 84.9% | 57.6% |
| 1mi8A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.53 | 47.0 | 4.00e-01 | 100.0% | 87.9% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 28.0 | 3.10e-01 | 87.2% | 64.5% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.52 | 47.0 | 3.99e-01 | 100.0% | 87.7% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 33.0 | 3.14e-01 | 100.0% | 53.5% |
| 2epbA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 26.0 | 2.87e-01 | 75.6% | 57.4% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.51 | 39.0 | 2.95e-01 | 97.7% | 35.2% |
| 5eokA05 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 42.0 | 3.17e-01 | 94.2% | 77.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3304930 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.93 | 86.0 | 7.74e-01 | 100.0% | 75.5% |
| 3653680 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.92 | 85.0 | 6.31e-01 | 100.0% | 43.7% |
| 3817355 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.92 | 85.0 | 7.16e-01 | 100.0% | 63.8% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.85 | 74.0 | 6.76e-01 | 100.0% | 72.7% |
| 179 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.78 | 69.0 | 6.28e-01 | 100.0% | 73.5% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 44.0 | 4.46e-01 | 100.0% | 57.6% |
| 5000162 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 69.0 | 6.49e-01 | 98.8% | 88.6% |
| 177 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.76 | 70.0 | 5.67e-01 | 100.0% | 60.1% |
| 3497989 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 38.0 | 4.46e-01 | 96.5% | 75.0% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 34.0 | 3.96e-01 | 96.5% | 63.1% |
| 4647050 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.70 | 40.0 | 4.16e-01 | 100.0% | 61.3% |
| 3967199 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 45.0 | 4.23e-01 | 100.0% | 56.2% |
| 2157301 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.67 | 37.0 | 4.01e-01 | 91.9% | 64.4% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 42.0 | 4.21e-01 | 100.0% | 61.1% |
| 4020093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 37.0 | 3.15e-01 | 95.3% | 34.1% |
| 5054112 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 41.0 | 4.73e-01 | 95.3% | 84.6% |
| 4973665 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 37.0 | 3.78e-01 | 100.0% | 55.3% |
| 3184389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 40.0 | 3.15e-01 | 95.3% | 31.4% |
| 3676628 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.64 | 32.0 | 2.89e-01 | 86.0% | 33.3% |
| 3631313 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.63 | 37.0 | 2.86e-01 | 96.5% | 26.3% |
| 4196537 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.63 | 35.0 | 3.73e-01 | 100.0% | 62.7% |
| 3736916 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 38.0 | 3.07e-01 | 95.3% | 32.5% |
| 4950972 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 47.0 | 4.30e-01 | 100.0% | 61.8% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.62 | 42.0 | 3.86e-01 | 100.0% | 54.5% |
| 3691620 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.61 | 39.0 | 3.52e-01 | 96.5% | 47.8% |
| 3440138 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.61 | 33.0 | 3.42e-01 | 98.8% | 53.8% |
| 3386975 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 49.0 | 4.43e-01 | 100.0% | 64.3% |
| 4946578 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.59 | 47.0 | 4.16e-01 | 100.0% | 60.0% |
| 4013325 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.59 | 40.0 | 3.56e-01 | 96.5% | 48.8% |
| 3971757 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 46.0 | 4.14e-01 | 100.0% | 63.3% |
| 5011662 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 48.0 | 3.91e-01 | 100.0% | 51.3% |
| 4266069 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.56 | 44.0 | 4.16e-01 | 100.0% | 69.5% |
| 5028788 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.56 | 51.0 | 4.31e-01 | 100.0% | 88.6% |
| 3257888 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.56 | 50.0 | 4.18e-01 | 100.0% | 90.0% |
| 4997597 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.55 | 50.0 | 4.14e-01 | 100.0% | 88.0% |
| 3617889 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 39.0 | 3.93e-01 | 89.5% | 72.9% |
| 4993437 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.53 | 46.0 | 3.87e-01 | 94.2% | 86.1% |
| 4945569 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.53 | 47.0 | 3.91e-01 | 100.0% | 87.7% |
| 3963364 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.53 | 48.0 | 4.01e-01 | 100.0% | 84.8% |
| 4943986 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.53 | 44.0 | 3.88e-01 | 100.0% | 61.6% |
| 259963 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.52 | 47.0 | 3.99e-01 | 100.0% | 87.7% |
| 5023511 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.52 | 45.0 | 4.07e-01 | 100.0% | 70.4% |
| 3218545 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.52 | 36.0 | 3.70e-01 | 94.2% | 74.1% |