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NC_047794.1__YP_009788241.1__HOR45_gp38__00038

Bact-Vir

NC_047794.1__YP_009788241.1__HOR45_gp38__00038

Identity

Accession:
NC_047794 ↗
Kingdom:
phage

Quality

80.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-85_182-203
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3aa0B01 1.20.58.570 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain 0.57 29.0 2.94e-01 97.6% 46.6%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.54 37.0 3.11e-01 70.6% 87.6%
3r7wC02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 33.0 3.10e-01 81.2% 49.5%
3llcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 42.0 3.08e-01 91.8% 87.7%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.52 36.0 3.19e-01 74.1% 63.0%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 45.0 4.39e-01 95.3% 100.0%
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 43.0 3.66e-01 91.8% 89.5%
5unhA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 44.0 3.09e-01 97.6% 90.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3615269 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.65 45.0 3.39e-01 72.9% 61.0%
3216326 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.59 48.0 3.25e-01 87.1% 32.5%
5083115 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.56 51.0 3.91e-01 100.0% 60.5%
5000862 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.54 42.0 2.98e-01 83.5% 85.6%
5078260 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.54 38.0 2.71e-01 74.1% 80.8%
5001593 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 33.0 2.80e-01 88.2% 37.9%
3782399 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 36.0 2.96e-01 72.9% 79.4%
5057974 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 40.0 3.73e-01 90.6% 100.0%
D2 medium residues 94-167
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3777032 5054.1.1.11 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › SK_channel 0.53 39.0 2.89e-01 82.4% 62.3%
3600992 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 36.0 2.88e-01 77.0% 36.3%