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NC_047803.1__YP_009788808.1__HOR54_gp02__00002
Bact-VirNC_047803.1__YP_009788808.1__HOR54_gp02__00002
Identity
- Accession:
- NC_047803 ↗
- Kingdom:
- phage
Quality
64.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autosignataviridae›
Kaohsiungvirus›
Vibrio_phage_Vp670
TaxID: 1932890
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-82
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kyaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 40.0 | 3.86e-01 | 94.8% | 55.3% |
| 3skvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 37.0 | 2.97e-01 | 88.3% | 30.5% |
| 2hsiA01 | 2.60.40.1590 | Mainly Beta › Sandwich › Immunoglobulin-like › Peptidoglycan hydrolase domains | 0.56 | 34.0 | 3.36e-01 | 93.5% | 56.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3412736 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 42.0 | 4.04e-01 | 98.7% | 54.4% |
| 3399455 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 43.0 | 4.10e-01 | 98.7% | 61.1% |
| 4020715 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.56 | 37.0 | 3.32e-01 | 100.0% | 47.3% |
| 4855483 | 4081.1.1.9 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M61_N | 0.55 | 47.0 | 3.73e-01 | 100.0% | 50.6% |
| 5005863 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.55 | 40.0 | 3.47e-01 | 97.4% | 48.8% |
| 4937202 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 3.66e-01 | 93.5% | 52.8% |
| 1388517 | 11.4.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF4352 | 0.54 | 42.0 | 3.49e-01 | 94.8% | 46.8% |
| 4011844 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 36.0 | 3.68e-01 | 93.5% | 77.3% |
| None | — | 0.51 | 39.0 | 3.57e-01 | 94.8% | 61.0% | |
| 3241311 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 43.0 | 3.33e-01 | 100.0% | 75.8% |
D2
medium
residues 561-768
D3
medium
residues 808-875_887-939