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NC_047810.1__YP_009789228.1__HOR61_gp63__00063
Bact-VirNC_047810.1__YP_009789228.1__HOR61_gp63__00063
Identity
- Accession:
- NC_047810 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Drexlerviridae›
Rtpvirus›
Escherichia_phage_vB_EcoS-IME253
TaxID: 1933412
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-76
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.92 | 64.0 | 7.48e-01 | 74.2% | 100.0% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.91 | 77.0 | 7.17e-01 | 98.5% | 74.7% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 67.0 | 6.96e-01 | 81.8% | 90.3% |
| 3fcnA00 | 1.20.1220.20 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Uncharcterised protein PF01724 | 0.86 | 63.0 | 4.61e-01 | 77.3% | 31.6% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.85 | 61.0 | 5.59e-01 | 75.8% | 61.2% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 66.0 | 5.81e-01 | 81.8% | 60.4% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.84 | 65.0 | 4.97e-01 | 81.8% | 39.7% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 65.0 | 5.61e-01 | 81.8% | 55.6% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 77.0 | 5.74e-01 | 100.0% | 78.9% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 62.0 | 6.57e-01 | 83.3% | 89.7% |
| 3zgxA02 | 6.10.140.1720 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 64.0 | 5.67e-01 | 81.8% | 65.9% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 62.0 | 5.23e-01 | 84.8% | 49.5% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.81 | 62.0 | 4.69e-01 | 81.8% | 41.2% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.81 | 62.0 | 5.23e-01 | 83.3% | 55.5% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 59.0 | 5.93e-01 | 77.3% | 89.4% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 56.0 | 5.94e-01 | 74.2% | 100.0% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.80 | 72.0 | 5.45e-01 | 100.0% | 84.8% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 56.0 | 5.46e-01 | 74.2% | 69.9% |
| 2x9xA04 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 56.0 | 6.11e-01 | 80.3% | 90.7% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.79 | 60.0 | 5.05e-01 | 81.8% | 67.9% |
| 1vp7A00 | 1.10.287.1040 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit | 0.78 | 55.0 | 5.44e-01 | 72.7% | 73.5% |
| 2o8pA00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.78 | 61.0 | 4.21e-01 | 84.8% | 26.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.78 | 59.0 | 6.13e-01 | 80.3% | 88.5% |
| 1t7sA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.77 | 61.0 | 4.85e-01 | 84.8% | 43.4% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.77 | 59.0 | 5.97e-01 | 81.8% | 100.0% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.77 | 57.0 | 5.78e-01 | 87.9% | 80.0% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 60.0 | 5.93e-01 | 84.8% | 80.3% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 58.0 | 6.05e-01 | 81.8% | 88.3% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 69.0 | 4.86e-01 | 100.0% | 90.5% |
| 3rkvA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.77 | 57.0 | 4.39e-01 | 80.3% | 36.1% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.76 | 56.0 | 5.11e-01 | 81.8% | 58.4% |
| 5dqqA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.76 | 67.0 | 5.41e-01 | 100.0% | 54.7% |
| 3o7pA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.76 | 58.0 | 3.96e-01 | 81.8% | 60.6% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 56.0 | 4.36e-01 | 80.3% | 36.8% |
| 3pt1A02 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.75 | 67.0 | 5.48e-01 | 100.0% | 85.8% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.75 | 56.0 | 5.36e-01 | 80.3% | 74.4% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 56.0 | 4.87e-01 | 81.8% | 55.9% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 65.0 | 5.98e-01 | 98.5% | 80.5% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.74 | 62.0 | 6.02e-01 | 98.5% | 83.8% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.74 | 56.0 | 4.60e-01 | 81.8% | 47.9% |
| 4n4gA01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.72 | 62.0 | 5.22e-01 | 95.5% | 99.1% |
| 4gyvE00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.72 | 62.0 | 4.39e-01 | 100.0% | 43.7% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.72 | 61.0 | 4.43e-01 | 100.0% | 80.6% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.71 | 56.0 | 4.78e-01 | 84.8% | 62.3% |
| 3eslA02 | 1.25.40.930 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.71 | 45.0 | 3.66e-01 | 72.7% | 35.3% |
| 3dyjA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.70 | 61.0 | 4.53e-01 | 97.0% | 89.2% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.69 | 58.0 | 5.60e-01 | 100.0% | 80.3% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 54.0 | 5.36e-01 | 86.4% | 93.0% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 52.0 | 5.07e-01 | 81.8% | 73.0% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 60.0 | 4.04e-01 | 97.0% | 68.6% |
| 2xq9A02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.69 | 59.0 | 4.92e-01 | 100.0% | 71.9% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 50.0 | 4.19e-01 | 78.8% | 45.3% |
| 3h6pC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 51.0 | 5.41e-01 | 83.3% | 94.6% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 50.0 | 5.13e-01 | 86.4% | 81.5% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 56.0 | 4.33e-01 | 95.5% | 60.0% |
| 3qsgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.64 | 53.0 | 4.48e-01 | 93.9% | 53.9% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 48.0 | 4.97e-01 | 81.8% | 93.3% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.60 | 43.0 | 4.02e-01 | 80.3% | 60.2% |
| 4c3eM00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.60 | 54.0 | 4.06e-01 | 98.5% | 63.9% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.60 | 51.0 | 4.41e-01 | 95.5% | 60.2% |
| 3qbrX00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.59 | 47.0 | 3.58e-01 | 89.4% | 74.5% |
| 2ongA01 | 1.50.10.130 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain | 0.51 | 43.0 | 3.11e-01 | 97.0% | 100.0% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4939089 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.96 | 73.0 | 4.56e-01 | 78.8% | 18.4% |
| 3397137 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.94 | 71.0 | 6.79e-01 | 78.8% | 69.3% |
| 3983659 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.91 | 63.0 | 6.35e-01 | 71.2% | 72.3% |
| 4590389 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.91 | 68.0 | 5.01e-01 | 81.8% | 33.5% |
| 3192393 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.90 | 70.0 | 3.96e-01 | 81.8% | 9.1% |
| 3872955 | 109.4.1.2380 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_10, TPR_12, TPR_MalT | 0.90 | 70.0 | 4.06e-01 | 81.8% | 11.4% |
| 4213046 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.89 | 69.0 | 6.97e-01 | 81.8% | 86.2% |
| 4667859 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.88 | 68.0 | 5.57e-01 | 81.8% | 48.7% |
| 4234530 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.88 | 69.0 | 5.55e-01 | 81.8% | 64.3% |
| 3681637 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.88 | 68.0 | 4.85e-01 | 81.8% | 32.0% |
| 4883924 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.88 | 69.0 | 6.43e-01 | 83.3% | 71.2% |
| 4214499 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.88 | 67.0 | 6.55e-01 | 80.3% | 75.7% |
| 3646011 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.88 | 68.0 | 6.65e-01 | 81.8% | 80.0% |
| 3348106 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.87 | 67.0 | 4.33e-01 | 81.8% | 21.5% |
| 3594586 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.85 | 66.0 | 5.77e-01 | 81.8% | 58.9% |
| 4944333 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.85 | 79.0 | 6.26e-01 | 100.0% | 62.4% |
| 3184698 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.85 | 66.0 | 5.86e-01 | 81.8% | 63.3% |
| 3471215 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.85 | 68.0 | 6.52e-01 | 84.8% | 76.0% |
| 4544002 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.84 | 59.0 | 6.58e-01 | 75.8% | 96.0% |
| 3894565 | 4207.1.2.65 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › OLF | 0.83 | 64.0 | 3.84e-01 | 81.8% | 14.0% |
| 3722750 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.83 | 64.0 | 4.01e-01 | 81.8% | 18.8% |
| 3676480 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.83 | 64.0 | 5.71e-01 | 81.8% | 74.4% |
| 3740547 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.83 | 64.0 | 5.30e-01 | 81.8% | 50.9% |
| 3755476 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.82 | 63.0 | 4.56e-01 | 81.8% | 32.6% |
| 3346803 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.82 | 62.0 | 3.97e-01 | 81.8% | 19.0% |
| 5041863 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.82 | 68.0 | 5.42e-01 | 87.9% | 60.0% |
| 3669818 | 3922.1.1.284 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF29520 | 0.81 | 64.0 | 4.55e-01 | 84.8% | 30.0% |
| 4972401 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.81 | 64.0 | 4.40e-01 | 84.8% | 87.4% |
| 5039743 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.81 | 62.0 | 4.57e-01 | 81.8% | 33.9% |
| 5084060 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.80 | 62.0 | 4.63e-01 | 81.8% | 36.1% |
| 4961346 | 3805.1.1.1 ↗ | alpha bundles › Hypothetical protein TTHB059 › Hypothetical protein TTHB059 › Hypothetical protein TTHB059 › DUF3209 | 0.80 | 61.0 | 4.96e-01 | 81.8% | 75.0% |
| 4951260 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.80 | 71.0 | 5.56e-01 | 100.0% | 50.0% |
| 3651038 | 192.29.1.221 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29520 | 0.80 | 62.0 | 4.91e-01 | 83.3% | 44.6% |
| 3224713 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.79 | 73.0 | 4.14e-01 | 100.0% | 14.0% |
| 3262024 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.78 | 70.0 | 4.85e-01 | 100.0% | 69.3% |
| 3411108 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.78 | 70.0 | 5.53e-01 | 100.0% | 56.3% |
| 4042824 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.78 | 61.0 | 5.72e-01 | 84.8% | 75.0% |
| 4238120 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.78 | 61.0 | 4.25e-01 | 84.8% | 65.9% |
| 3299091 | 3567.1.1.126 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PF29520 | 0.77 | 67.0 | 5.27e-01 | 97.0% | 80.7% |
| 3416038 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.77 | 68.0 | 5.46e-01 | 100.0% | 58.5% |
| 3800850 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 66.0 | 4.76e-01 | 98.5% | 59.5% |
| 3931107 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.76 | 68.0 | 5.40e-01 | 100.0% | 71.5% |
| 3749996 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.75 | 57.0 | 4.64e-01 | 84.8% | 43.2% |
| 3713201 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.75 | 57.0 | 4.40e-01 | 81.8% | 97.2% |
| 3229885 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.74 | 64.0 | 5.71e-01 | 100.0% | 71.4% |
| 5014264 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.74 | 65.0 | 5.88e-01 | 100.0% | 77.8% |
| 3306390 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.73 | 56.0 | 4.82e-01 | 83.3% | 52.4% |
| 3949864 | 632.1.1.37 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF6474 | 0.73 | 64.0 | 5.79e-01 | 100.0% | 78.9% |
| 4971099 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.72 | 61.0 | 5.50e-01 | 100.0% | 68.9% |
| 3441901 | 632.1.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Rx_N | 0.70 | 60.0 | 5.71e-01 | 100.0% | 83.7% |
| 3355246 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.70 | 52.0 | 4.97e-01 | 81.8% | 76.2% |
| 3276690 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 59.0 | 4.77e-01 | 100.0% | 82.2% |
| 4581983 | 5086.1.1.13 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › T3SSipB | 0.69 | 62.0 | 4.82e-01 | 100.0% | 89.3% |
| 4541195 | 3755.3.1.470 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T3SSipB | 0.69 | 62.0 | 4.93e-01 | 100.0% | 96.2% |
| 3588519 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.68 | 51.0 | 3.84e-01 | 80.3% | 33.9% |
| 3757999 | 219.1.1.9 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 | 0.67 | 52.0 | 3.42e-01 | 84.8% | 97.6% |