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NC_047812.1__YP_009789313.1__HOR63_gp67__00018
Bact-VirNC_047812.1__YP_009789313.1__HOR63_gp67__00018
Identity
- Accession:
- NC_047812 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Drexlerviridae›
Loudonvirus›
Escherichia_phage_vB_EcoS_CEB_EC3a
TaxID: 1933774
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-62
Domain cluster:
rep: JF770475.1__AEI91257.1__X__00057__D2-56
D2
medium
residues 69-109
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fysA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 50.0 | 3.46e-01 | 85.4% | 88.9% |
| 3dzaA02 | 6.10.250.2140 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 51.0 | 4.44e-01 | 92.7% | 59.7% |
| 5e5nA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.58 | 41.0 | 3.26e-01 | 78.0% | 39.8% |
| 4zdnA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.56 | 42.0 | 3.28e-01 | 95.1% | 36.2% |
| 1i1rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 3.55e-01 | 100.0% | 41.0% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 39.0 | 3.18e-01 | 95.1% | 84.2% |
| 4qyrA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.52 | 41.0 | 3.24e-01 | 87.8% | 81.5% |
| 2ma6A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 42.0 | 3.80e-01 | 97.6% | 65.6% |
| 4tktA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.51 | 40.0 | 3.27e-01 | 87.8% | 86.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4465267 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.69 | 54.0 | 3.47e-01 | 85.4% | 51.7% |
| 4366393 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.65 | 52.0 | 3.35e-01 | 85.4% | 53.3% |
| 3283316 | 304.147.1.3 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain › PF26919 | 0.58 | 44.0 | 4.14e-01 | 95.1% | 100.0% |
| 3215027 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.53 | 40.0 | 3.75e-01 | 100.0% | 67.9% |