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NC_047856.1__YP_010843815.1__QIH97_gp16__00016

Bact-Vir

NC_047856.1__YP_010843815.1__QIH97_gp16__00016

Identity

Accession:
NC_047856 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Teetrevirus› Enterobacter_phage_KNP3

TaxID: 1871708

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-27
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.76 56.0 3.58e-01 81.5% 73.1%
3cebA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.75 57.0 4.17e-01 96.3% 29.4%
4i1sB00 4.10.80.340 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › 0.74 55.0 4.78e-01 96.3% 50.0%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.74 57.0 4.31e-01 96.3% 45.3%
6jptA00 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.72 52.0 3.50e-01 88.9% 19.8%
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 53.0 3.66e-01 81.5% 48.5%
4je3B00 3.10.20.720 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.70 53.0 3.96e-01 92.6% 71.4%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.70 57.0 3.74e-01 100.0% 20.1%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 52.0 3.72e-01 96.3% 26.3%
3o2iA00 3.30.70.2710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 51.0 3.73e-01 96.3% 26.9%
2jqjA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.69 49.0 3.40e-01 96.3% 21.5%
4ozjA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 53.0 3.75e-01 100.0% 87.5%
4n01A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.67 46.0 3.19e-01 81.5% 18.8%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.66 46.0 3.28e-01 85.2% 22.5%
4pkcC00 6.20.90.20 Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit 0.66 48.0 4.60e-01 100.0% 78.0%
3aonA00 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 46.0 2.92e-01 92.6% 18.1%
1r61A00 3.50.30.50 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase 0.66 49.0 2.98e-01 88.9% 13.7%
1ti2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 47.0 3.61e-01 96.3% 58.3%
1ti2B01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 47.0 3.17e-01 96.3% 33.8%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.64 44.0 3.34e-01 88.9% 40.0%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 3.54e-01 92.6% 31.6%
2hsiA01 2.60.40.1590 Mainly Beta › Sandwich › Immunoglobulin-like › Peptidoglycan hydrolase domains 0.64 43.0 3.34e-01 81.5% 26.8%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 48.0 3.19e-01 96.3% 34.1%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 45.0 3.35e-01 85.2% 82.6%
3d03A01 3.60.21.40 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain 0.63 42.0 2.96e-01 92.6% 19.1%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 45.0 3.41e-01 100.0% 44.0%
2v8qB00 6.20.250.60 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.61 42.0 3.51e-01 92.6% 37.0%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.61 45.0 3.58e-01 96.3% 32.5%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.61 46.0 3.35e-01 81.5% 24.7%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 44.0 4.43e-01 77.8% 75.0%
2l66A00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.61 44.0 3.82e-01 88.9% 47.2%
3p9aF00 1.10.132.80 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.60 46.0 3.14e-01 100.0% 79.9%
2azeB00 6.10.250.540 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.60 45.0 3.25e-01 85.2% 22.8%
3o27B00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.60 41.0 3.69e-01 96.3% 45.6%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.60 42.0 2.47e-01 88.9% 8.4%
1vraA00 3.60.70.12 Alpha Beta › 4-Layer Sandwich › L-amino peptidase D-ALA esterase/amidase › L-amino peptidase D-ALA esterase/amidase 0.59 43.0 2.77e-01 96.3% 79.1%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 45.0 2.91e-01 81.5% 14.0%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 44.0 3.19e-01 96.3% 85.0%
1p1lA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 43.0 3.15e-01 92.6% 59.8%
3dmgA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 40.0 2.57e-01 92.6% 12.9%
2gy5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 2.99e-01 88.9% 53.5%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 41.0 2.41e-01 96.3% 7.9%
3f1yA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 43.0 2.54e-01 92.6% 7.9%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 2.54e-01 85.2% 9.3%
3bt7A02 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 2.76e-01 88.9% 16.6%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 38.0 3.86e-01 96.3% 68.4%
1jpyX00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.56 41.0 2.98e-01 100.0% 34.2%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.56 41.0 2.31e-01 100.0% 23.4%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.56 40.0 3.95e-01 100.0% 73.0%
2xvsA00 2.40.50.550 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 38.0 2.56e-01 92.6% 66.9%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.55 43.0 2.56e-01 74.1% 45.2%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.55 40.0 2.65e-01 96.3% 77.1%
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 37.0 2.46e-01 96.3% 13.7%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 37.0 2.36e-01 96.3% 11.5%
4bqqB02 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.54 37.0 2.43e-01 92.6% 67.4%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.00e-01 100.0% 31.2%
2znhA03 6.20.40.10 Special › Other non-globular › Porin MspA ribbon fold › 0.54 37.0 3.49e-01 96.3% 57.4%
2b9dA01 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 42.0 3.96e-01 92.6% 59.0%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 35.0 2.37e-01 100.0% 14.6%
2yxdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 35.0 2.40e-01 100.0% 15.6%
1tgjA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.52 36.0 2.67e-01 92.6% 22.3%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 35.0 2.62e-01 92.6% 39.1%
3ksrA01 6.20.370.100 Special › Other non-globular › Rhinovirus 14, subunit 4 › 0.52 34.0 3.29e-01 96.3% 100.0%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.50 38.0 3.57e-01 100.0% 63.6%
2qzbA00 2.60.460.10 Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain 0.50 36.0 2.50e-01 92.6% 17.2%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5037750 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.81 63.0 3.83e-01 96.3% 15.9%
4966168 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.80 60.0 3.38e-01 92.6% 7.0%
3587666 330.1.1.11 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DUF1071 0.79 64.0 4.10e-01 96.3% 25.2%
3475708 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.78 59.0 5.17e-01 85.2% 52.3%
5032176 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.77 60.0 4.89e-01 96.3% 43.3%
3370065 309.1.2.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.77 64.0 4.31e-01 96.3% 24.8%
3769484 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.76 61.0 4.44e-01 96.3% 32.5%
4954522 878.1.1.1 ↗ a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.75 56.0 3.97e-01 88.9% 25.5%
3255418 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.75 59.0 3.29e-01 96.3% 33.8%
4187457 4967.1.1.6 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 0.74 57.0 3.75e-01 96.3% 20.0%
3682045 376.1.3.10 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2,zf-HC5HC2H_2 0.72 52.0 3.45e-01 92.6% 18.5%
3995477 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 54.0 4.36e-01 85.2% 41.8%
4886985 7523.1.1.16 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP 0.72 51.0 3.47e-01 88.9% 19.2%
3727070 206.1.1.15 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Fructosamin_kin 0.71 52.0 3.07e-01 92.6% 9.6%
3993949 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.71 50.0 4.53e-01 85.2% 51.1%
4001707 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.70 50.0 3.69e-01 85.2% 27.1%
5027694 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.70 54.0 4.52e-01 88.9% 46.3%
5055291 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.69 47.0 4.02e-01 85.2% 38.3%
4564327 878.1.1.1 ↗ a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.69 51.0 3.75e-01 88.9% 31.3%
3491344 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 48.0 3.79e-01 100.0% 33.3%
4591311 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.69 51.0 2.72e-01 88.9% 3.2%
3676790 2484.1.1.157 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.69 52.0 3.39e-01 96.3% 17.4%
3925690 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.69 54.0 4.12e-01 92.6% 33.3%
3539534 354.1.1.8 ↗ few secondary structure elements › Sea anemone toxin k-like › Sea anemone toxin k-related › Sea anemone toxin k-related › MAGP 0.68 49.0 4.92e-01 92.6% 83.3%
3589192 101.1.1.68 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.68 52.0 3.95e-01 96.3% 32.5%
5056727 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.67 49.0 3.08e-01 96.3% 12.7%
3792928 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.66 48.0 4.54e-01 85.2% 57.5%
3602563 2007.1.5.14 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › PF27247 0.66 47.0 3.23e-01 96.3% 20.8%
5078891 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.66 47.0 3.95e-01 85.2% 41.8%
5047179 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.66 52.0 3.03e-01 96.3% 18.6%
5077468 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.65 51.0 3.08e-01 100.0% 60.0%
3709357 2003.1.1.59 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_5 0.65 48.0 2.97e-01 100.0% 19.3%
4189845 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.65 46.0 2.86e-01 96.3% 13.6%
4079740 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.64 45.0 3.21e-01 88.9% 38.1%
2337294 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.63 47.0 3.15e-01 100.0% 31.1%
3581425 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.63 45.0 3.03e-01 88.9% 17.8%
1162919 11.1.1.596 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR-1-like_5th 0.63 45.0 4.47e-01 88.9% 73.5%
3735314 7579.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.63 45.0 2.66e-01 88.9% 8.5%
2755266 3709.1.1.1 ↗ a+b two layers › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › T7SS_ESX1_EccB 0.63 44.0 4.25e-01 88.9% 68.4%
3397455 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.62 41.0 4.05e-01 92.6% 96.0%
3277197 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.61 45.0 3.34e-01 96.3% 26.3%
3986836 375.1.1.253 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 0.61 44.0 3.87e-01 88.9% 65.5%
5026457 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.61 44.0 2.78e-01 100.0% 13.0%
3575164 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.61 44.0 4.23e-01 88.9% 60.0%
5034346 207.2.1.13 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.60 41.0 2.41e-01 100.0% 9.6%
3001810 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 45.0 4.27e-01 92.6% 59.5%
4965094 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.60 40.0 2.79e-01 92.6% 27.1%
5075144 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.60 46.0 3.61e-01 100.0% 37.3%
3038102 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.57 39.0 3.40e-01 85.2% 41.1%
5047754 221.10.1.0 ↗ a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain 0.57 43.0 3.15e-01 77.8% 26.7%
4973203 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.56 45.0 3.94e-01 85.2% 46.0%
3580898 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 48.0 3.02e-01 88.9% 12.5%
4981961 101.1.2.819 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27231 0.56 45.0 2.97e-01 100.0% 91.3%
3264140 3082.1.1.0 ↗ extended segments › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 0.55 39.0 3.92e-01 85.2% 65.7%
3266052 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.55 41.0 2.74e-01 85.2% 15.9%
4953602 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.54 36.0 3.18e-01 100.0% 40.0%
4959664 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.54 39.0 2.44e-01 96.3% 60.9%
3735615 3670.1.1.2 ↗ alpha complex topology › NCD2 domain › NCD2 domain › NCD2 domain › PF26087 0.54 41.0 3.03e-01 96.3% 26.0%
4938781 2003.1.5.179 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 0.54 35.0 2.44e-01 96.3% 15.8%
3603213 2002.1.1.70 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase 0.54 38.0 2.18e-01 92.6% 5.7%
3825435 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.54 36.0 2.50e-01 100.0% 17.0%
5074082 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.54 43.0 2.84e-01 81.5% 15.2%
4991076 2487.1.1.9 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Cyclase 0.53 34.0 2.22e-01 92.6% 13.1%
3373362 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 38.0 2.12e-01 92.6% 4.0%
4980377 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.52 37.0 2.35e-01 92.6% 21.0%
3343945 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 33.0 2.53e-01 100.0% 29.6%
3325240 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.51 39.0 2.64e-01 100.0% 43.4%
3251044 242.1.1.2 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.50 46.0 2.96e-01 81.5% 14.3%