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NC_047880.1__YP_009794411.1__HOS33_gp237__00237
Bact-VirNC_047880.1__YP_009794411.1__HOS33_gp237__00237
Identity
- Accession:
- NC_047880 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 1983553
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-89
Domain cluster:
representative
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.77 | 43.0 | 4.46e-01 | 100.0% | 58.8% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.74 | 53.0 | 4.07e-01 | 74.2% | 49.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 56.0 | 5.07e-01 | 85.4% | 96.6% |
| 1w07A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.69 | 60.0 | 4.99e-01 | 100.0% | 82.7% |
| 1rtwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.68 | 52.0 | 3.92e-01 | 79.8% | 71.2% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.68 | 60.0 | 4.97e-01 | 100.0% | 66.3% |
| 2qnlA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.67 | 60.0 | 4.97e-01 | 100.0% | 70.4% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 48.0 | 4.31e-01 | 100.0% | 58.0% |
| 1jmwA00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.64 | 46.0 | 3.89e-01 | 74.2% | 68.5% |
| 2yjkC00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 55.0 | 4.67e-01 | 100.0% | 70.7% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 55.0 | 4.79e-01 | 100.0% | 69.6% |
| 1mhyG01 | 1.20.1280.10 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 1 | 0.62 | 35.0 | 3.88e-01 | 92.1% | 70.6% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 42.0 | 3.99e-01 | 71.9% | 94.4% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.60 | 42.0 | 3.68e-01 | 71.9% | 49.6% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 45.0 | 4.38e-01 | 78.7% | 87.6% |
| 5u1aL00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 52.0 | 4.33e-01 | 100.0% | 60.8% |
| 2wauA02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.00e-01 | 77.5% | 98.4% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 53.0 | 4.37e-01 | 100.0% | 59.9% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 43.0 | 4.91e-01 | 98.9% | 100.0% |
| 3lomA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 47.0 | 3.31e-01 | 86.5% | 35.4% |
| 1hxaA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 49.0 | 3.23e-01 | 91.0% | 34.3% |
| 3q23A08 | 1.20.140.110 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.58 | 51.0 | 4.33e-01 | 100.0% | 85.7% |
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 51.0 | 4.10e-01 | 100.0% | 63.3% |
| 4gc0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.58 | 50.0 | 3.72e-01 | 100.0% | 75.5% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 44.0 | 4.20e-01 | 80.9% | 100.0% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.58 | 47.0 | 4.64e-01 | 87.6% | 97.9% |
| 1bf5A01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.57 | 51.0 | 4.15e-01 | 98.9% | 98.2% |
| 3m0fB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 41.0 | 3.71e-01 | 75.3% | 74.8% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 42.0 | 3.87e-01 | 78.7% | 86.0% |
| 1qlbA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.57 | 43.0 | 4.00e-01 | 82.0% | 66.1% |
| 3vnxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 50.0 | 3.90e-01 | 100.0% | 53.3% |
| 1bvp103 | 1.10.170.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 3 › Bluetongue Virus 10, subunit 1, domain 3 | 0.56 | 40.0 | 3.97e-01 | 76.4% | 88.5% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.56 | 42.0 | 3.06e-01 | 80.9% | 37.5% |
| 2q5zB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.55 | 39.0 | 3.85e-01 | 97.8% | 69.1% |
| 3p5pA03 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 46.0 | 3.23e-01 | 94.4% | 43.0% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 47.0 | 4.02e-01 | 100.0% | 59.0% |
| 3ddeB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.54 | 44.0 | 3.44e-01 | 94.4% | 78.4% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 46.0 | 3.93e-01 | 97.8% | 61.7% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.54 | 40.0 | 4.35e-01 | 98.9% | 95.9% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.53 | 41.0 | 3.82e-01 | 98.9% | 65.5% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.53 | 42.0 | 3.83e-01 | 85.4% | 72.0% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.53 | 50.0 | 4.42e-01 | 100.0% | 94.3% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.53 | 45.0 | 3.42e-01 | 94.4% | 54.0% |
| 7wz5A01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 45.0 | 3.80e-01 | 95.5% | 64.9% |
| 1b0bA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 40.0 | 3.56e-01 | 85.4% | 94.3% |
| 3llwD00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 44.0 | 3.15e-01 | 97.8% | 85.1% |
| 1gzsB00 | 1.10.4120.10 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain | 0.51 | 47.0 | 3.77e-01 | 100.0% | 63.0% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 47.0 | 3.36e-01 | 100.0% | 37.1% |
| 1eswA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 43.0 | 2.76e-01 | 98.9% | 42.2% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 42.0 | 3.62e-01 | 94.4% | 63.7% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3727605 | 5059.1.1.8 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA | 0.78 | 47.0 | 3.69e-01 | 100.0% | 30.9% |
| 3514484 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.76 | 69.0 | 4.55e-01 | 100.0% | 41.4% |
| 3907132 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.75 | 43.0 | 3.31e-01 | 100.0% | 26.8% |
| 3344305 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.74 | 53.0 | 4.21e-01 | 100.0% | 40.0% |
| 4020871 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.72 | 49.0 | 4.27e-01 | 100.0% | 47.7% |
| 4010684 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.72 | 65.0 | 4.22e-01 | 100.0% | 97.5% |
| 3267994 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.72 | 52.0 | 4.95e-01 | 76.4% | 94.3% |
| 3441518 | 3559.1.1.11 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med28 | 0.72 | 46.0 | 4.09e-01 | 100.0% | 48.3% |
| 5024439 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.71 | 64.0 | 5.45e-01 | 100.0% | 85.5% |
| 3788609 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 50.0 | 4.72e-01 | 75.3% | 87.3% |
| 4980332 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.70 | 62.0 | 5.20e-01 | 100.0% | 89.7% |
| 5062284 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.70 | 48.0 | 4.38e-01 | 97.8% | 54.8% |
| 4369161 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.70 | 61.0 | 5.32e-01 | 100.0% | 87.9% |
| 3827271 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.69 | 52.0 | 4.59e-01 | 79.8% | 76.2% |
| 4947622 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.69 | 59.0 | 5.21e-01 | 97.8% | 100.0% |
| 3458146 | 5059.1.1.8 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA | 0.67 | 47.0 | 4.19e-01 | 74.2% | 75.4% |
| 3725172 | 633.23.1.36 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PF30929 | 0.67 | 58.0 | 4.65e-01 | 98.9% | 96.2% |
| 3703032 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 49.0 | 4.42e-01 | 78.7% | 94.4% |
| 3468446 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.65 | 56.0 | 4.87e-01 | 98.9% | 98.6% |
| 3227991 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.65 | 46.0 | 3.79e-01 | 76.4% | 55.4% |
| 3228511 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.65 | 56.0 | 4.82e-01 | 100.0% | 98.7% |
| 3964502 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.65 | 45.0 | 4.21e-01 | 71.9% | 80.0% |
| 3291371 | 5050.1.1.60 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_3 | 0.63 | 55.0 | 4.34e-01 | 100.0% | 89.2% |
| 4600416 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.63 | 54.0 | 4.21e-01 | 98.9% | 90.4% |
| 4946446 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.62 | 46.0 | 3.78e-01 | 77.5% | 58.2% |
| 3488158 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.62 | 44.0 | 3.98e-01 | 75.3% | 80.0% |
| 4017914 | 601.55.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 | 0.61 | 44.0 | 3.61e-01 | 76.4% | 61.2% |
| 3856031 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 46.0 | 4.11e-01 | 79.8% | 72.8% |
| 3894478 | 604.9.1.2 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Strabismus | 0.61 | 42.0 | 4.03e-01 | 97.8% | 61.0% |
| 3750086 | 150.3.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1 | 0.61 | 53.0 | 4.21e-01 | 100.0% | 57.9% |
| 4540118 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.60 | 48.0 | 3.38e-01 | 87.6% | 39.8% |
| 3563976 | 601.4.1.79 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › 4HB_KIF14 | 0.59 | 46.0 | 3.78e-01 | 83.1% | 57.5% |
| 4951992 | 5041.1.1.55 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › DUF1622 | 0.58 | 42.0 | 4.11e-01 | 76.4% | 92.0% |
| 3855699 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.58 | 51.0 | 4.24e-01 | 100.0% | 59.4% |
| 3424354 | 226.1.1.20 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › PF30468, PF30469 | 0.57 | 43.0 | 3.31e-01 | 100.0% | 37.4% |
| 5047089 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 39.0 | 3.68e-01 | 71.9% | 80.0% |
| 5001604 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 50.0 | 3.90e-01 | 100.0% | 93.0% |
| 3399062 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.56 | 42.0 | 4.36e-01 | 80.9% | 96.5% |
| 3280601 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.56 | 48.0 | 4.41e-01 | 100.0% | 71.3% |
| 4523639 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.56 | 51.0 | 3.95e-01 | 100.0% | 99.5% |
| 3340607 | 5059.1.1.8 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA | 0.55 | 42.0 | 4.13e-01 | 79.8% | 100.0% |
| 3473423 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.55 | 51.0 | 4.27e-01 | 100.0% | 89.0% |
| 3596922 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.55 | 43.0 | 3.56e-01 | 100.0% | 47.5% |
| 3998505 | 604.9.1.2 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Strabismus | 0.54 | 39.0 | 3.58e-01 | 93.3% | 58.3% |
| 4970935 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 46.0 | 3.68e-01 | 100.0% | 86.5% |
| 4942015 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.54 | 44.0 | 3.15e-01 | 89.9% | 43.2% |
| 3173112 | 1203.1.2.4 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › Vps55 | 0.52 | 48.0 | 4.14e-01 | 100.0% | 89.6% |
| 3262295 | 1203.1.2.9 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › TMEM128 | 0.52 | 36.0 | 3.22e-01 | 71.9% | 68.4% |
| 3761465 | 601.1.1.104 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › 4HB_KIF14 | 0.52 | 46.0 | 3.88e-01 | 100.0% | 88.4% |
| 5081618 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 39.0 | 3.58e-01 | 100.0% | 60.8% |
| 4547477 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.50 | 45.0 | 4.20e-01 | 100.0% | 80.9% |
D2
high
residues 114-224
Domain cluster:
representative
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 59.0 | 5.72e-01 | 98.2% | 75.4% |
| 2pfdA03 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.74 | 67.0 | 5.47e-01 | 98.2% | 76.4% |
| 7z0sE02 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.73 | 66.0 | 4.69e-01 | 98.2% | 59.6% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.72 | 66.0 | 5.38e-01 | 100.0% | 75.0% |
| 3ay5A02 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.72 | 66.0 | 5.75e-01 | 100.0% | 72.1% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.72 | 51.0 | 4.89e-01 | 91.0% | 64.5% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.71 | 51.0 | 4.83e-01 | 74.8% | 72.2% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.70 | 64.0 | 5.79e-01 | 99.1% | 81.0% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 63.0 | 5.33e-01 | 100.0% | 71.1% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.70 | 64.0 | 6.24e-01 | 99.1% | 99.2% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 58.0 | 5.39e-01 | 100.0% | 72.5% |
| 3rzeA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.70 | 63.0 | 4.75e-01 | 100.0% | 61.9% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 44.0 | 5.22e-01 | 82.9% | 97.3% |
| 1w07A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.69 | 62.0 | 5.36e-01 | 98.2% | 92.3% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.69 | 60.0 | 5.30e-01 | 98.2% | 67.1% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 46.0 | 4.95e-01 | 84.7% | 79.4% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 60.0 | 5.57e-01 | 99.1% | 79.2% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 61.0 | 5.41e-01 | 99.1% | 71.1% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 60.0 | 5.43e-01 | 99.1% | 74.7% |
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.68 | 51.0 | 4.36e-01 | 78.4% | 56.1% |
| 4cmyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 60.0 | 5.31e-01 | 99.1% | 68.1% |
| 2b0hA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.67 | 49.0 | 4.72e-01 | 75.7% | 74.2% |
| 1dpsA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 60.0 | 5.31e-01 | 98.2% | 69.2% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 60.0 | 5.16e-01 | 99.1% | 66.9% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.67 | 57.0 | 5.84e-01 | 93.7% | 100.0% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 59.0 | 5.38e-01 | 98.2% | 78.0% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.67 | 60.0 | 5.48e-01 | 100.0% | 90.6% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 57.0 | 5.38e-01 | 97.3% | 77.8% |
| 3vnxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 58.0 | 4.87e-01 | 98.2% | 59.5% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 46.0 | 4.82e-01 | 100.0% | 77.5% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 58.0 | 5.15e-01 | 98.2% | 67.5% |
| 1r2jA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.66 | 60.0 | 5.51e-01 | 100.0% | 92.4% |
| 1z6oA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 58.0 | 4.77e-01 | 99.1% | 58.5% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 42.0 | 4.95e-01 | 79.3% | 96.0% |
| 1z6oM00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 59.0 | 4.97e-01 | 100.0% | 60.2% |
| 4cybD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 58.0 | 5.04e-01 | 100.0% | 66.1% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 48.0 | 4.90e-01 | 75.7% | 96.2% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 48.0 | 4.80e-01 | 77.5% | 91.2% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.64 | 57.0 | 5.10e-01 | 100.0% | 71.4% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 57.0 | 5.07e-01 | 100.0% | 71.1% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.64 | 48.0 | 4.79e-01 | 80.2% | 75.2% |
| 1q16C01 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.63 | 48.0 | 3.89e-01 | 80.2% | 53.7% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.63 | 48.0 | 4.56e-01 | 81.1% | 91.0% |
| 5ux1D00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 55.0 | 4.59e-01 | 99.1% | 61.4% |
| 1wvtA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.62 | 55.0 | 5.01e-01 | 96.4% | 79.7% |
| 2r6tB01 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.62 | 56.0 | 4.89e-01 | 99.1% | 75.3% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 50.0 | 5.30e-01 | 86.5% | 97.9% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 40.0 | 4.69e-01 | 77.5% | 97.3% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 46.0 | 4.70e-01 | 78.4% | 96.3% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.61 | 42.0 | 4.71e-01 | 73.9% | 89.8% |
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.61 | 55.0 | 4.94e-01 | 99.1% | 80.1% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.60 | 44.0 | 3.88e-01 | 100.0% | 52.8% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.60 | 41.0 | 4.11e-01 | 71.2% | 67.5% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.60 | 49.0 | 4.28e-01 | 88.3% | 70.3% |
| 2g2dA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.60 | 53.0 | 4.74e-01 | 99.1% | 80.0% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.65e-01 | 82.9% | 85.1% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.60 | 44.0 | 4.35e-01 | 77.5% | 88.0% |
| 6e1kA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 50.0 | 5.00e-01 | 99.1% | 91.1% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 52.0 | 4.48e-01 | 100.0% | 61.7% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.59 | 42.0 | 4.62e-01 | 81.1% | 93.2% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.59 | 46.0 | 4.12e-01 | 83.8% | 65.4% |
| 1w33A00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.59 | 41.0 | 3.56e-01 | 73.0% | 82.3% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.58 | 46.0 | 4.64e-01 | 82.9% | 95.5% |
| 4p3gD00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.58 | 50.0 | 4.11e-01 | 92.8% | 83.6% |
| 2yayA02 | 1.20.1670.10 | Mainly Alpha › Up-down Bundle › all-alpha NTP pyrophosphatase › Type II deoxyuridine triphosphatase | 0.58 | 44.0 | 4.14e-01 | 80.2% | 98.5% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 44.0 | 4.54e-01 | 81.1% | 94.1% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 44.0 | 4.55e-01 | 82.9% | 97.1% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.56 | 46.0 | 4.20e-01 | 94.6% | 66.9% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 47.0 | 3.77e-01 | 91.9% | 88.7% |
| 2wauA02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 41.0 | 4.05e-01 | 78.4% | 99.2% |
| 4abnA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 39.0 | 2.96e-01 | 72.1% | 90.3% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.55 | 46.0 | 4.16e-01 | 91.9% | 78.6% |
| 1k90B03 | 1.20.140.60 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.53 | 46.0 | 4.60e-01 | 93.7% | 94.8% |
| 4aybA07 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.53 | 39.0 | 3.82e-01 | 76.6% | 89.2% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.53 | 42.0 | 4.13e-01 | 85.6% | 92.3% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.51 | 48.0 | 4.03e-01 | 100.0% | 86.4% |
| 1f1mA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.51 | 46.0 | 4.07e-01 | 100.0% | 96.9% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.50 | 39.0 | 4.25e-01 | 85.6% | 96.8% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 40.0 | 3.23e-01 | 84.7% | 85.4% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3421505 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.73 | 67.0 | 5.75e-01 | 100.0% | 86.5% |
| 3927844 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 52.0 | 3.95e-01 | 76.6% | 43.7% |
| 3874130 | 133.1.1.5 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › DH_Alsin | 0.70 | 61.0 | 4.94e-01 | 95.5% | 84.8% |
| 3974230 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 54.0 | 5.56e-01 | 80.2% | 98.1% |
| 3905846 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 62.0 | 4.80e-01 | 98.2% | 84.9% |
| 3710098 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.70 | 52.0 | 4.98e-01 | 76.6% | 92.0% |
| 3720250 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.69 | 63.0 | 5.79e-01 | 100.0% | 97.9% |
| 4944333 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.69 | 62.0 | 5.97e-01 | 97.3% | 99.2% |
| 4011664 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.69 | 49.0 | 3.99e-01 | 73.9% | 70.0% |
| 3725172 | 633.23.1.36 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PF30929 | 0.68 | 60.0 | 5.12e-01 | 98.2% | 100.0% |
| 3219498 | 5001.1.1.63 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srab | 0.68 | 63.0 | 4.41e-01 | 100.0% | 44.7% |
| 3809724 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 50.0 | 4.64e-01 | 76.6% | 77.1% |
| 3939383 | 603.1.1.19 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N | 0.68 | 51.0 | 4.06e-01 | 77.5% | 58.1% |
| 3805313 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.68 | 61.0 | 5.18e-01 | 100.0% | 83.8% |
| 4205755 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.68 | 60.0 | 5.29e-01 | 99.1% | 68.5% |
| 4929363 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.68 | 53.0 | 5.32e-01 | 82.9% | 100.0% |
| 3485322 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.68 | 61.0 | 5.81e-01 | 100.0% | 100.0% |
| 4958744 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.68 | 53.0 | 5.39e-01 | 82.0% | 96.4% |
| 3904284 | 601.1.3.15 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › A middle domain of Talin 1 › MNR | 0.67 | 48.0 | 4.07e-01 | 73.0% | 58.3% |
| 3705680 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 49.0 | 5.31e-01 | 82.0% | 88.4% |
| 3416318 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.67 | 51.0 | 4.89e-01 | 81.1% | 70.7% |
| 3469377 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.66 | 50.0 | 4.43e-01 | 78.4% | 64.5% |
| 3727543 | 192.29.1.23 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF6536 | 0.66 | 47.0 | 3.88e-01 | 73.9% | 54.6% |
| 3921890 | 603.2.1.1 ↗ | alpha bundles › STAT-like › STAT › STAT › STAT_alpha | 0.66 | 48.0 | 4.41e-01 | 75.7% | 88.3% |
| 3947174 | 5001.1.1.38 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › MASE4 | 0.66 | 60.0 | 4.60e-01 | 100.0% | 54.8% |
| 3605875 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.66 | 50.0 | 5.01e-01 | 79.3% | 100.0% |
| 3952 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.66 | 58.0 | 4.85e-01 | 99.1% | 62.0% |
| 3744258 | 109.4.1.1231 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_NAA35 | 0.65 | 53.0 | 3.85e-01 | 88.3% | 72.7% |
| 3214191 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 50.0 | 5.01e-01 | 81.1% | 96.5% |
| 3611390 | 604.8.1.0 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo | 0.64 | 47.0 | 4.40e-01 | 77.5% | 91.4% |
| 54507 | 601.8.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Outer surface protein C (OspC) › Outer surface protein C (OspC) | 0.64 | 46.0 | 4.02e-01 | 73.9% | 62.3% |
| 4941914 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.64 | 47.0 | 3.91e-01 | 77.5% | 62.6% |
| 3783911 | 633.6.1.24 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › FKS1_dom2 | 0.64 | 44.0 | 4.05e-01 | 71.2% | 75.2% |
| 4573783 | 5086.1.1.91 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PRM1 | 0.63 | 56.0 | 4.16e-01 | 98.2% | 78.9% |
| 4227260 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 47.0 | 4.54e-01 | 78.4% | 89.6% |
| 163919 | 4132.1.1.1 ↗ | alpha bundles › IpaD-like › IpaD-like › IpaD-like › T3SS_TC | 0.63 | 57.0 | 4.03e-01 | 100.0% | 73.4% |
| 3447097 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.62 | 44.0 | 4.45e-01 | 73.9% | 96.4% |
| 3452562 | 604.12.1.58 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF1218 | 0.61 | 47.0 | 4.66e-01 | 82.0% | 96.7% |
| 3606304 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.61 | 50.0 | 4.54e-01 | 89.2% | 98.0% |
| 3577230 | 604.1.1.5 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 | 0.61 | 46.0 | 4.76e-01 | 79.3% | 99.0% |
| 4017645 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.60 | 48.0 | 4.02e-01 | 83.8% | 87.6% |
| 3472984 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.60 | 47.0 | 4.00e-01 | 82.0% | 68.6% |
| 3459083 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.60 | 48.0 | 3.71e-01 | 82.9% | 74.2% |
| 3833545 | 109.4.1.541 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4220 | 0.60 | 53.0 | 3.87e-01 | 97.3% | 83.7% |
| 3737838 | 109.4.1.25 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DIL | 0.59 | 52.0 | 3.27e-01 | 94.6% | 35.4% |
| 3972604 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.59 | 44.0 | 4.03e-01 | 77.5% | 75.2% |
| 3597047 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.59 | 54.0 | 4.04e-01 | 98.2% | 72.1% |
| 4048976 | 5000.4.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › Endotoxin_N | 0.59 | 53.0 | 3.98e-01 | 100.0% | 81.1% |
| 3795757 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.59 | 52.0 | 3.91e-01 | 95.5% | 75.8% |
| 3830111 | 5050.1.1.69 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › TauE | 0.59 | 49.0 | 3.50e-01 | 92.8% | 87.2% |
| 3942760 | 1079.1.1.8 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › LysE | 0.59 | 48.0 | 3.98e-01 | 90.1% | 93.2% |
| 3175623 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.59 | 52.0 | 4.18e-01 | 100.0% | 77.8% |
| 4945037 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.58 | 48.0 | 4.34e-01 | 86.5% | 89.0% |
| 3903775 | 192.8.1.419 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PF27603 | 0.58 | 43.0 | 4.25e-01 | 78.4% | 84.2% |
| 3738232 | 601.7.1.56 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › FKS1_dom2 | 0.57 | 43.0 | 3.95e-01 | 80.2% | 70.0% |
| 3725481 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.57 | 43.0 | 3.76e-01 | 78.4% | 70.0% |
| 3931229 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 50.0 | 3.49e-01 | 100.0% | 67.1% |
| 3619600 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 40.0 | 2.98e-01 | 73.0% | 63.8% |
| 3924665 | 604.1.1.136 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_7 | 0.57 | 46.0 | 4.76e-01 | 87.4% | 93.3% |
| 3586228 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 44.0 | 4.59e-01 | 82.0% | 99.0% |
| 3405912 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 48.0 | 3.97e-01 | 97.3% | 54.1% |
| 4649121 | 1075.5.1.5 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Rft-1 | 0.56 | 42.0 | 3.30e-01 | 79.3% | 74.6% |
| 3663497 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 45.0 | 3.97e-01 | 100.0% | 61.3% |
| 3962159 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.55 | 42.0 | 3.75e-01 | 82.0% | 63.1% |
| 3639418 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 3.49e-01 | 91.9% | 50.4% |
| 4439048 | 603.1.1.107 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Mlo | 0.53 | 46.0 | 3.56e-01 | 98.2% | 76.9% |
| 3732117 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 44.0 | 2.89e-01 | 93.7% | 29.3% |
| 3397986 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.51 | 47.0 | 3.97e-01 | 100.0% | 96.1% |
| 3812703 | 3758.1.1.7 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › BPS1 | 0.51 | 44.0 | 3.55e-01 | 96.4% | 67.7% |