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NC_047880.1__YP_009794456.1__HOS33_gp282__00282

Bact-Vir

NC_047880.1__YP_009794456.1__HOS33_gp282__00282

Identity

Accession:
NC_047880 ↗
Kingdom:
phage

Quality

95.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sasquatchvirus› Erwinia_phage_vB_EamM_Y3

TaxID: 1983553

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-110
PDB
Domain cluster: rep: MT354569.1__QOC57980.1__phiK7B1_125__00125__D3-81
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.71 52.0 3.55e-01 76.2% 46.1%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 49.0 3.34e-01 77.2% 37.7%
2ghsA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 47.0 3.37e-01 77.2% 43.7%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.61 35.0 3.57e-01 79.2% 55.9%
2n93A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 37.0 3.38e-01 79.2% 48.5%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.56 47.0 3.41e-01 92.1% 32.7%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.54 36.0 3.50e-01 86.1% 60.9%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 44.0 2.97e-01 93.1% 25.2%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.52 41.0 3.57e-01 85.1% 76.0%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 46.0 4.15e-01 100.0% 85.0%
4iglB00 2.180.10.10 Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core 0.51 43.0 2.65e-01 94.1% 64.7%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 41.0 3.03e-01 93.1% 30.0%
3rf9B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 43.0 3.19e-01 97.0% 65.7%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 41.0 3.50e-01 86.1% 94.9%
3h0gH00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 35.0 3.31e-01 72.3% 87.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385221 5.1.3.217 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PSII_BNR 0.65 46.0 3.35e-01 75.2% 46.6%
3229011 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 38.0 3.38e-01 82.2% 41.4%
3238997 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 39.0 3.57e-01 82.2% 46.6%
2145749 330.19.1.1 ↗ a+b two layers › dsRBD-like › Anti-CRISPR protein Acr30-35/AcrF1 › Anti-CRISPR protein Acr30-35/AcrF1 › Acr30-35_AcrF1 0.63 47.0 5.14e-01 90.1% 98.8%
4957722 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.62 39.0 3.49e-01 78.2% 46.4%
4939442 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.52e-01 92.1% 34.4%
3893973 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 40.0 3.31e-01 79.2% 40.6%
3324455 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 48.0 3.30e-01 92.1% 40.5%
3559756 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 47.0 3.30e-01 89.1% 28.5%
3994644 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 47.0 2.78e-01 92.1% 13.0%
4019954 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.56 46.0 3.20e-01 92.1% 31.2%
3736378 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 46.0 3.06e-01 92.1% 32.7%
3484000 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 47.0 2.70e-01 98.0% 44.8%
3925021 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.55 35.0 3.21e-01 81.2% 48.1%
3782114 5.1.4.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.54 44.0 2.85e-01 92.1% 35.8%
3744425 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.54 45.0 3.02e-01 93.1% 33.0%
3183454 5.1.5.88 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.53 45.0 2.85e-01 93.1% 20.7%
3284034 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.53 41.0 3.15e-01 80.2% 87.6%
4950809 5.1.3.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TrAA12 0.53 43.0 3.03e-01 91.1% 26.6%
4451022 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 40.0 3.80e-01 89.1% 68.3%
3617123 5.1.4.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.52 43.0 2.81e-01 92.1% 26.0%
4019192 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 40.0 3.44e-01 84.2% 86.1%
5018346 5.1.3.22 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH 0.51 44.0 3.13e-01 100.0% 46.6%
4303651 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.50 37.0 3.67e-01 90.1% 72.6%