NC_047896.1__YP_009949012.2__HOS49_gp01__00001

Bact-Vir

Identity

Accession:: NC_047896 ↗
Kingdom:: phage

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Friunavirus› Acinetobacter_phage_SWH-Ab-1

TaxID: 2053604

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-92

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6f95A01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.58	43.0	3.54e-01	79.3%	99.3%
1txdA02	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.56	36.0	3.17e-01	70.7%	43.8%
1p6pA00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.54	39.0	3.41e-01	75.6%	71.2%
2oyzA00	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.54	27.0	2.66e-01	85.4%	41.5%
3hnoA01	3.40.50.450	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.53	46.0	3.45e-01	100.0%	71.0%
2ddmB00	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.53	45.0	3.22e-01	100.0%	82.7%
2rjqA02	3.40.1620.60	Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold ›	0.52	29.0	3.06e-01	80.5%	60.3%
4ntqB00	3.30.2450.20	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold ›	0.52	37.0	3.12e-01	75.6%	100.0%
4m7xA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.50	44.0	4.30e-01	98.8%	96.7%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4225322	4263.2.1.1 ↗	a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext	0.64	38.0	4.15e-01	75.6%	73.8%
5039400	2484.1.1.34 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1	0.60	53.0	3.61e-01	100.0%	62.0%
3618372	2484.1.1.99 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17	0.59	45.0	4.06e-01	84.1%	93.3%
4320694	2004.1.1.429 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15	0.58	44.0	2.86e-01	79.3%	99.7%
5043655	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.57	51.0	4.28e-01	100.0%	82.9%
3596476	227.1.1.11 ↗	a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1	0.57	40.0	3.39e-01	74.4%	78.3%
2814146	896.1.1.1 ↗	a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e	0.55	36.0	3.70e-01	86.6%	71.1%
3230359	207.1.1.66 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557	0.54	37.0	2.59e-01	75.6%	19.7%
3713627	5.1.4.6 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40	0.54	46.0	3.21e-01	97.6%	89.7%
5020098	2.4.1.1 ↗	beta barrels › OB-fold › MOP-like › MOP-like › TOBE	0.54	28.0	3.06e-01	73.2%	57.1%
3596570	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.52	44.0	3.06e-01	96.3%	88.2%