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NC_047897.1__YP_009795967.1__HOS50_gp095__00120
Bact-VirNC_047897.1__YP_009795967.1__HOS50_gp095__00120
Identity
- Accession:
- NC_047897 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Taxonomy
TaxID: 2053682
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-39
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.70 | 57.0 | 4.26e-01 | 100.0% | 42.1% |
| 3mqgA02 | 2.20.70.110 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.70 | 55.0 | 5.54e-01 | 100.0% | 97.4% |
| 1jj2Y00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.68 | 55.0 | 4.56e-01 | 94.7% | 52.1% |
| 2pziB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 55.0 | 3.78e-01 | 100.0% | 53.8% |
| 7zj3D01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 51.0 | 4.15e-01 | 94.7% | 55.6% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 46.0 | 4.71e-01 | 89.5% | 91.2% |
| 4oj5B01 | 3.30.2020.50 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.62 | 43.0 | 3.49e-01 | 73.7% | 64.6% |
| 2jneA00 | 2.10.290.10 | Mainly Beta › Ribbon › Rubredoxin-like › YfgJ-like | 0.58 | 43.0 | 3.88e-01 | 97.4% | 98.6% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.58 | 41.0 | 3.59e-01 | 86.8% | 51.4% |
| 4fxtA01 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.56 | 44.0 | 3.59e-01 | 97.4% | 89.5% |
| 4l8nA03 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 38.0 | 2.59e-01 | 73.7% | 63.4% |
| 1szpB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 2.78e-01 | 94.7% | 94.8% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 44.0 | 3.55e-01 | 100.0% | 69.5% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 42.0 | 3.98e-01 | 97.4% | 89.6% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 34.0 | 3.57e-01 | 73.7% | 76.5% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.92 | 73.0 | 7.62e-01 | 86.8% | 94.3% |
| 5029687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.92 | 81.0 | 7.72e-01 | 100.0% | 95.6% |
| 4978678 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.91 | 72.0 | 6.32e-01 | 86.8% | 60.0% |
| 3739700 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.90 | 66.0 | 7.11e-01 | 78.9% | 100.0% |
| 3681134 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.90 | 71.0 | 6.47e-01 | 86.8% | 66.0% |
| 5030549 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.89 | 74.0 | 6.49e-01 | 97.4% | 63.6% |
| 4973787 | 375.1.1.11 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27 | 0.89 | 69.0 | 5.77e-01 | 86.8% | 50.8% |
| 5073026 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.89 | 79.0 | 7.19e-01 | 100.0% | 90.0% |
| 4969798 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.89 | 72.0 | 6.33e-01 | 94.7% | 61.8% |
| 4947213 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.89 | 72.0 | 6.33e-01 | 94.7% | 61.8% |
| 4968925 | 375.1.1.356 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29210 | 0.88 | 78.0 | 7.75e-01 | 100.0% | 95.0% |
| 4945444 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.88 | 72.0 | 7.42e-01 | 89.5% | 97.1% |
| 4991529 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.87 | 72.0 | 6.17e-01 | 97.4% | 58.3% |
| 3328437 | 375.1.1.139 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › EDR4-like_1st | 0.87 | 71.0 | 7.01e-01 | 89.5% | 85.0% |
| 3826688 | 375.1.1.139 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › EDR4-like_1st | 0.87 | 62.0 | 6.80e-01 | 76.3% | 100.0% |
| 4028456 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.87 | 76.0 | 7.23e-01 | 100.0% | 88.9% |
| 3786601 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.87 | 67.0 | 6.89e-01 | 84.2% | 91.4% |
| 3678606 | 375.1.1.212 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_2 | 0.86 | 67.0 | 6.94e-01 | 86.8% | 94.3% |
| 5060529 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.86 | 71.0 | 5.78e-01 | 94.7% | 50.0% |
| 3606741 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.86 | 65.0 | 6.73e-01 | 84.2% | 91.4% |
| 5076006 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.86 | 68.0 | 4.01e-01 | 89.5% | 12.5% |
| 5034126 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.86 | 71.0 | 6.06e-01 | 97.4% | 58.3% |
| 3507653 | 375.4.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like | 0.86 | 67.0 | 4.32e-01 | 86.8% | 20.9% |
| 4028457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.86 | 62.0 | 6.71e-01 | 78.9% | 100.0% |
| 3380132 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.86 | 68.0 | 6.75e-01 | 89.5% | 87.5% |
| 5067229 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.85 | 66.0 | 6.31e-01 | 86.8% | 73.3% |
| 4979347 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.85 | 70.0 | 5.67e-01 | 94.7% | 50.0% |
| 5047885 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 70.0 | 6.63e-01 | 100.0% | 77.8% |
| 4015648 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 62.0 | 6.51e-01 | 81.6% | 93.9% |
| 5078006 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.84 | 68.0 | 5.61e-01 | 94.7% | 50.0% |
| 4995783 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 69.0 | 6.80e-01 | 97.4% | 87.5% |
| 3802581 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 64.0 | 6.63e-01 | 86.8% | 94.3% |
| 5041477 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.83 | 67.0 | 5.82e-01 | 97.4% | 58.3% |
| 3467249 | 376.1.4.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › PF26200 | 0.83 | 70.0 | 5.86e-01 | 100.0% | 55.4% |
| 5035898 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.83 | 66.0 | 5.70e-01 | 97.4% | 56.7% |
| 3362800 | 375.1.1.193 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_1 | 0.83 | 66.0 | 6.29e-01 | 89.5% | 77.8% |
| 3683940 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.83 | 60.0 | 5.92e-01 | 78.9% | 75.0% |
| 5047273 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 69.0 | 6.81e-01 | 100.0% | 90.0% |
| 4978303 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.82 | 68.0 | 5.98e-01 | 94.7% | 63.6% |
| 3303263 | 376.1.6.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-LSD1 | 0.82 | 66.0 | 6.58e-01 | 92.1% | 95.0% |
| 4981108 | 375.1.1.331 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5817 | 0.82 | 65.0 | 6.28e-01 | 97.4% | 77.8% |
| 3437434 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.81 | 60.0 | 6.19e-01 | 84.2% | 91.4% |
| 4970821 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.81 | 66.0 | 5.42e-01 | 94.7% | 50.0% |
| 3656347 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 63.0 | 6.45e-01 | 89.5% | 100.0% |
| 5075187 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.80 | 63.0 | 5.54e-01 | 94.7% | 58.3% |
| 3671234 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.80 | 62.0 | 6.32e-01 | 89.5% | 97.1% |
| 3419900 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.79 | 60.0 | 6.15e-01 | 86.8% | 94.3% |
| 3270748 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.79 | 66.0 | 5.56e-01 | 100.0% | 55.4% |
| 3537482 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.79 | 65.0 | 6.01e-01 | 100.0% | 72.0% |
| 3179128 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.79 | 64.0 | 6.35e-01 | 92.1% | 92.5% |
| 4968629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 65.0 | 5.79e-01 | 92.1% | 72.2% |
| 3907697 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.78 | 64.0 | 5.19e-01 | 100.0% | 48.0% |
| 3825063 | 1067.1.1.0 ↗ | few secondary structure elements › pheromone Ep-1 › pheromone Ep-1 › pheromone Ep-1 | 0.78 | 60.0 | 6.22e-01 | 92.1% | 94.3% |
| 4972401 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.78 | 69.0 | 4.24e-01 | 100.0% | 26.0% |
| 3514931 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 61.0 | 6.04e-01 | 89.5% | 85.0% |
| 5036396 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 59.0 | 5.95e-01 | 86.8% | 87.2% |
| 3846875 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.77 | 63.0 | 5.37e-01 | 100.0% | 55.4% |
| 5017725 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.76 | 66.0 | 4.14e-01 | 100.0% | 20.0% |
| 4999482 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.75 | 66.0 | 4.08e-01 | 100.0% | 18.6% |
| 3581878 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.75 | 66.0 | 5.53e-01 | 100.0% | 58.5% |
| 3600464 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 60.0 | 3.56e-01 | 92.1% | 22.0% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 61.0 | 4.31e-01 | 97.4% | 30.0% |
| 4979574 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.74 | 64.0 | 4.17e-01 | 100.0% | 23.5% |
| 4978165 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.74 | 63.0 | 3.99e-01 | 100.0% | 20.0% |
| 5077070 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.71 | 55.0 | 4.88e-01 | 92.1% | 56.7% |
| 4945128 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 57.0 | 5.92e-01 | 92.1% | 100.0% |
| 5066735 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 55.0 | 5.14e-01 | 89.5% | 72.0% |
| 4122844 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.64 | 50.0 | 4.95e-01 | 89.5% | 87.5% |
| 3992738 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 47.0 | 4.54e-01 | 97.4% | 71.1% |
| 3609075 | 375.1.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP | 0.63 | 50.0 | 3.76e-01 | 97.4% | 35.0% |
| 4255854 | 4294.1.1.8 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › PF27112 | 0.63 | 52.0 | 4.83e-01 | 100.0% | 76.0% |
| 4439164 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 46.0 | 2.94e-01 | 94.7% | 14.1% |
| 3527717 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 46.0 | 4.30e-01 | 86.8% | 92.5% |
| 5049039 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.62 | 45.0 | 2.62e-01 | 78.9% | 7.6% |
| 3188758 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 48.0 | 4.58e-01 | 86.8% | 91.1% |
| 4282792 | 375.1.1.44 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-NADH-PPase | 0.61 | 43.0 | 4.43e-01 | 94.7% | 88.6% |
| 3590612 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.60 | 48.0 | 4.78e-01 | 100.0% | 92.5% |
| 5055298 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 41.0 | 3.75e-01 | 78.9% | 50.0% |
| 4056467 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 3.94e-01 | 92.1% | 60.0% |
| 4969991 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.58 | 42.0 | 4.18e-01 | 94.7% | 75.6% |
| 3980811 | 375.1.1.60 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PriA_CRR | 0.58 | 41.0 | 3.85e-01 | 92.1% | 75.0% |
| 3584285 | 5.1.11.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DPPIV_N | 0.51 | 38.0 | 2.28e-01 | 100.0% | 13.6% |
| 3189250 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.50 | 40.0 | 3.52e-01 | 100.0% | 87.7% |
| 3790194 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.50 | 40.0 | 3.87e-01 | 92.1% | 100.0% |