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NC_047914.1__YP_009797427.1__HOS67_gp75__00075

Bact-Vir

NC_047914.1__YP_009797427.1__HOS67_gp75__00075

Identity

Accession:
NC_047914 ↗
Kingdom:
phage

Quality

95.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Taranisvirus› Faecalibacterium_phage_FP_Taranis

TaxID: 2070186

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-132
PDB
Domain cluster: rep: SR-VP_2-4_scaffold_141_2952615_prodigal-single.1__X__X__00274__D10-149
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF08291.17 best Peptidase_M15_3 77.1 1.60e-21 82.3% 100.0%
PF05951.19 Peptidase_M15_2 30.4 4.10e-07 77.7% 64.0%
D2 high residues 158-215
PDB
Domain cluster: rep: MW388005.1__QQO39020.1__X__00046__D8-66
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01471.24 best PG_binding_1 45.2 1.20e-11 86.2% 82.5%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bkhA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.93 84.0 7.13e-01 94.8% 77.9%
4c2dA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.88 81.0 6.97e-01 98.3% 83.5%
4g54A02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.87 78.0 7.24e-01 96.6% 84.7%
7aj9A01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.80 68.0 6.47e-01 93.1% 97.0%
1eakA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.79 65.0 6.37e-01 89.7% 88.9%
1ck7A01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.78 66.0 4.28e-01 91.4% 90.2%
2ikbC00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.63 54.0 3.91e-01 96.6% 37.3%
4eswA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 43.0 3.48e-01 77.6% 73.9%
2m4eA00 1.20.120.1930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family 0.59 49.0 4.39e-01 96.6% 84.9%
2d0bA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 46.0 3.19e-01 96.6% 93.6%
1n2aA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 35.0 2.92e-01 82.8% 36.8%
1ej5A00 3.90.810.10 Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain 0.54 41.0 3.47e-01 96.6% 47.7%
3cl3A01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.53 44.0 4.02e-01 98.3% 84.5%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 32.0 3.21e-01 82.8% 55.7%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3957237 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.93 83.0 7.45e-01 93.1% 93.3%
4117418 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 80.0 7.94e-01 91.4% 100.0%
3955223 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.90 83.0 7.26e-01 96.6% 90.0%
1165079 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.89 83.0 6.78e-01 98.3% 74.0%
4055540 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.88 79.0 7.40e-01 96.6% 89.9%
4173379 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.88 80.0 7.04e-01 96.6% 80.0%
224034 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.87 78.0 6.92e-01 96.6% 75.3%
2859574 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.87 78.0 7.26e-01 96.6% 87.3%
3299326 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.87 76.0 7.27e-01 93.1% 93.8%
4010440 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.86 80.0 7.22e-01 100.0% 88.0%
1877329 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.86 74.0 6.70e-01 93.1% 78.9%
4380775 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.86 77.0 5.07e-01 94.8% 30.5%
4312892 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.84 76.0 7.52e-01 96.6% 98.3%
3356981 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.83 76.0 6.71e-01 98.3% 83.7%
3221065 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.83 69.0 6.31e-01 89.7% 92.0%
3933825 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.81 67.0 6.15e-01 89.7% 85.3%
3539881 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.80 72.0 6.56e-01 98.3% 85.3%
3893524 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 67.0 6.23e-01 89.7% 88.6%
3764906 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 71.0 6.29e-01 96.6% 83.7%
3994858 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 72.0 6.39e-01 98.3% 90.0%
2819638 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 70.0 5.52e-01 98.3% 64.7%
4160453 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.75 63.0 5.94e-01 91.4% 87.1%
4350179 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.74 59.0 5.65e-01 89.7% 75.4%
3247155 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.73 64.0 6.23e-01 98.3% 90.8%
4857662 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.70 59.0 5.55e-01 93.1% 83.1%
3371371 4229.1.1.4 ↗ alpha bundles › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Hs1pro-1_C 0.68 51.0 3.30e-01 93.1% 18.4%
5072615 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.58 44.0 3.74e-01 87.9% 83.6%
3262410 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.57 42.0 3.87e-01 82.8% 61.3%
3369564 130.1.1.39 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7086 0.56 50.0 3.77e-01 100.0% 59.3%
4425508 6056.1.1.0 ↗ alpha arrays › SP1917-like › SP1917-like › SP1917-like 0.56 45.0 4.00e-01 89.7% 62.4%
3591815 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.54 43.0 3.96e-01 86.2% 73.3%
3612367 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.54 41.0 3.32e-01 81.0% 50.0%
3456260 185.1.1.1 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl 0.54 41.0 3.24e-01 81.0% 59.2%