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NC_047925.1__YP_009798247.1__HOS79_gp027__00027

Bact-Vir

NC_047925.1__YP_009798247.1__HOS79_gp027__00027

Identity

Accession:
NC_047925 ↗
Kingdom:
phage

Quality

74.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lenusvirus› Lactobacillus_phage_Nyseid

TaxID: 2079432

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-65
PDB
Domain cluster: rep: MG592496.1__AUR89327.1__NVP1122A_36__00036__D3-75
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v9fA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.75 51.0 3.16e-01 79.6% 12.5%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 58.0 5.39e-01 83.3% 74.2%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.74 50.0 3.08e-01 79.6% 12.5%
1zxtA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 56.0 5.42e-01 83.3% 78.7%
3jyyA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.73 54.0 4.00e-01 79.6% 64.2%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 55.0 5.18e-01 83.3% 77.3%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.72 48.0 5.02e-01 81.5% 76.0%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 54.0 5.05e-01 83.3% 71.6%
3gvpA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 50.0 3.57e-01 75.9% 52.2%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 59.0 4.47e-01 90.7% 66.9%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 49.0 3.03e-01 79.6% 12.9%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 53.0 4.78e-01 83.3% 64.4%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.68 56.0 4.41e-01 94.4% 95.0%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 56.0 3.79e-01 88.9% 79.7%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 58.0 3.96e-01 94.4% 80.7%
3m1cB01 3.30.390.170 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.68 56.0 4.51e-01 98.1% 46.8%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.67 45.0 4.47e-01 70.4% 66.7%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 52.0 4.91e-01 85.2% 75.8%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.67 55.0 3.82e-01 94.4% 58.8%
1rsgA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 58.0 3.71e-01 94.4% 84.1%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 60.0 3.55e-01 98.1% 78.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.70e-01 94.4% 80.9%
3we0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 56.0 3.54e-01 94.4% 66.7%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.65 45.0 4.23e-01 79.6% 59.1%
2v4jB01 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 3.77e-01 83.3% 53.8%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 50.0 4.27e-01 88.9% 94.8%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.49e-01 85.2% 70.7%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 58.0 3.83e-01 98.1% 72.2%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 53.0 4.52e-01 94.4% 88.2%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 50.0 3.12e-01 94.4% 14.6%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 56.0 3.92e-01 96.3% 54.2%
5towB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 50.0 3.54e-01 85.2% 38.7%
1hyuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 54.0 3.74e-01 94.4% 79.7%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 58.0 4.43e-01 100.0% 77.1%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 53.0 4.19e-01 96.3% 74.4%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 51.0 4.47e-01 94.4% 94.3%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.63 43.0 3.39e-01 70.4% 50.4%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 53.0 3.53e-01 94.4% 67.4%
5ygqA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 54.0 3.57e-01 98.1% 70.3%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.30e-01 96.3% 73.6%
6cmzA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 49.0 3.89e-01 94.4% 39.5%
2auwA01 3.30.2020.10 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain 0.62 45.0 3.97e-01 79.6% 87.8%
4z32A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 53.0 4.49e-01 100.0% 62.5%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 46.0 4.21e-01 83.3% 64.9%
1nijA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 46.0 3.12e-01 81.5% 25.4%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 54.0 3.53e-01 98.1% 64.2%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.27e-01 96.3% 76.8%
1d8cA02 2.170.170.11 Mainly Beta › Beta Complex › Malate synthase G - maily-beta sub-domain › Malate synthase G - maily-beta sub-domain 0.61 52.0 3.96e-01 96.3% 69.5%
6efaA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.61 46.0 4.08e-01 81.5% 97.4%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.60 41.0 4.24e-01 96.3% 81.2%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 52.0 3.69e-01 98.1% 57.7%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 49.0 4.70e-01 94.4% 100.0%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 43.0 3.70e-01 81.5% 81.1%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 46.0 3.60e-01 85.2% 46.2%
4m8aA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.59 46.0 4.35e-01 87.0% 82.1%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 4.35e-01 96.3% 77.4%
1ecsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 41.0 3.26e-01 77.8% 81.7%
3b0xA03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.57 43.0 3.47e-01 81.5% 74.3%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.88e-01 100.0% 62.7%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.57 44.0 4.13e-01 88.9% 97.1%
2vseA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 44.0 3.35e-01 88.9% 82.4%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 3.91e-01 83.3% 100.0%
1a2fA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.56 48.0 3.77e-01 100.0% 50.4%
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.55 48.0 3.52e-01 98.1% 53.9%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 42.0 3.50e-01 85.2% 57.4%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 41.0 3.82e-01 96.3% 61.6%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.54 46.0 4.77e-01 100.0% 100.0%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.54 46.0 4.74e-01 100.0% 100.0%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.53 46.0 4.74e-01 100.0% 100.0%
1r8oB01 2.30.30.480 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.79e-01 83.3% 84.8%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 42.0 4.00e-01 92.6% 88.1%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.53 42.0 2.90e-01 90.7% 66.7%
3e82E02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 43.0 3.01e-01 96.3% 97.5%
1r9cA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 37.0 2.95e-01 77.8% 76.8%
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.51 39.0 3.20e-01 85.2% 62.6%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.50 44.0 4.43e-01 100.0% 100.0%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940177 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 53.0 4.85e-01 74.1% 54.3%
5049872 56.2.1.0 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT 0.77 53.0 4.83e-01 72.2% 70.0%
4032637 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.77 59.0 5.88e-01 83.3% 89.1%
3929699 5.1.4.244 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd 0.76 50.0 3.17e-01 74.1% 14.0%
3991693 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 54.0 4.91e-01 75.9% 62.9%
1527848 5.1.4.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Reg_prop 0.75 51.0 3.10e-01 79.6% 11.0%
1487666 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.74 58.0 5.78e-01 85.2% 83.6%
5022847 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.72 54.0 4.80e-01 79.6% 88.0%
4034336 4.8.1.13 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › ComK 0.71 63.0 4.64e-01 100.0% 92.4%
4278911 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.71 55.0 5.66e-01 88.9% 90.0%
4112791 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.70 54.0 5.61e-01 88.9% 90.0%
4928472 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.69 46.0 4.09e-01 79.6% 46.3%
3995153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 54.0 4.47e-01 90.7% 90.5%
3593467 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 47.0 2.86e-01 72.2% 10.7%
3990001 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.69 58.0 5.91e-01 94.4% 96.2%
3925946 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 51.0 3.06e-01 79.6% 86.5%
2552766 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.68 57.0 4.10e-01 92.6% 81.9%
4172704 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.68 58.0 5.85e-01 96.3% 96.4%
3911252 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 54.0 4.61e-01 92.6% 100.0%
3291190 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.68 59.0 3.74e-01 96.3% 68.3%
3906078 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 53.0 4.47e-01 90.7% 94.0%
3454744 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.68 60.0 3.47e-01 94.4% 45.0%
3314585 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.68 47.0 3.05e-01 72.2% 15.7%
3723053 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.68 58.0 3.62e-01 94.4% 58.9%
4481543 220.1.1.150 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.68 55.0 4.88e-01 90.7% 98.8%
1391704 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.68 59.0 4.39e-01 94.4% 73.8%
863091 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.68 59.0 4.53e-01 94.4% 81.6%
2156991 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.67 57.0 3.41e-01 92.6% 76.3%
4013462 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.67 58.0 3.62e-01 96.3% 67.2%
3256547 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 54.0 4.49e-01 92.6% 86.0%
3939128 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 55.0 4.40e-01 92.6% 90.9%
3187470 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.67 59.0 3.72e-01 98.1% 59.9%
3698027 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.66 60.0 3.68e-01 98.1% 57.6%
4288670 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.66 59.0 3.55e-01 98.1% 60.0%
1833392 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.66 59.0 4.12e-01 96.3% 88.1%
4322502 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.66 59.0 3.42e-01 98.1% 68.8%
4072958 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.66 60.0 5.62e-01 98.1% 89.2%
4079351 2003.1.2.25 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.66 58.0 3.78e-01 98.1% 66.8%
3699577 220.1.1.236 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 0.66 56.0 4.49e-01 96.3% 55.5%
3624661 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.65 59.0 4.18e-01 98.1% 60.0%
4019919 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.65 59.0 3.63e-01 98.1% 71.2%
3254075 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 47.0 2.86e-01 87.0% 11.7%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.62e-01 92.6% 78.0%
4389738 2003.1.2.11 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.65 57.0 3.88e-01 98.1% 74.9%
3722079 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.65 59.0 3.47e-01 98.1% 75.1%
3264236 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 54.0 4.58e-01 100.0% 95.0%
3919542 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.65 53.0 4.41e-01 94.4% 82.0%
4536182 220.1.1.93 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_6 0.64 55.0 4.04e-01 100.0% 52.9%
3973145 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 54.0 5.46e-01 94.4% 92.7%
None — 0.64 45.0 2.53e-01 72.2% 5.7%
3417244 220.1.1.64 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.64 54.0 4.55e-01 96.3% 76.8%
3944169 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.64 57.0 4.04e-01 100.0% 41.8%
4121453 5.1.4.172 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 0.64 47.0 2.64e-01 79.6% 96.3%
3896415 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.64 51.0 4.38e-01 94.4% 91.6%
4243231 5.1.4.172 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 0.64 45.0 2.55e-01 72.2% 6.4%
4933326 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.64 44.0 3.87e-01 83.3% 46.6%
3720028 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 4.07e-01 94.4% 95.7%
3773509 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 51.0 5.00e-01 100.0% 85.0%
3493556 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 53.0 4.20e-01 94.4% 87.3%
3547186 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.07e-01 96.3% 76.8%
3513810 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 53.0 4.02e-01 96.3% 73.3%
4943272 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 56.0 5.39e-01 98.1% 98.3%
3265019 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 51.0 4.28e-01 98.1% 63.1%
3556321 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.61 48.0 4.25e-01 87.0% 73.8%
5049487 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.61 51.0 3.77e-01 94.4% 54.5%
3612239 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 47.0 2.91e-01 83.3% 95.5%
3581945 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.61 47.0 4.64e-01 100.0% 81.7%
4944767 101.1.2.883 ↗ alpha arrays › HTH › HTH › winged helix domain › Radical_SAM 0.61 43.0 4.00e-01 79.6% 56.0%
3247727 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 3.84e-01 98.1% 70.0%
3659103 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.59 44.0 4.57e-01 79.6% 100.0%
3920767 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 49.0 4.18e-01 100.0% 61.0%
5016434 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 47.0 4.35e-01 94.4% 97.3%
3869436 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 49.0 4.16e-01 100.0% 62.0%
4953123 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.58 47.0 2.79e-01 87.0% 45.1%
4933970 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.58 52.0 5.08e-01 100.0% 98.3%
2579116 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.58 51.0 4.90e-01 100.0% 91.9%
2512682 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 38.0 3.88e-01 94.4% 69.1%
4043931 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.57 51.0 4.96e-01 100.0% 100.0%
5055783 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.56 46.0 3.95e-01 94.4% 100.0%
4623924 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.54 49.0 4.87e-01 98.1% 96.4%
3727988 206.1.1.17 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.53 42.0 2.96e-01 90.7% 34.7%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 40.0 3.94e-01 85.2% 83.3%
3480350 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 41.0 3.93e-01 88.9% 87.7%
3641913 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.53 47.0 4.18e-01 98.1% 72.0%
3679125 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.53 48.0 3.27e-01 100.0% 30.0%
3662052 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.52 46.0 3.97e-01 98.1% 62.4%
3897880 3935.1.1.1 ↗ extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 › eIF_4EBP 0.52 37.0 3.73e-01 83.3% 74.5%
2106031 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.52 45.0 4.40e-01 98.1% 93.2%
4387556 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.51 38.0 3.24e-01 83.3% 79.8%
D2 high residues 87-151
PDB
Domain cluster: rep: NC_071083.1__YP_010683437.1__PQF09_gp43__00043__D112-175
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ol0B00 6.20.90.30 Special › Other non-globular › SH3 type barrels. › 0.77 45.0 5.41e-01 72.3% 92.7%
1qcvA00 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.55 41.0 4.40e-01 100.0% 98.1%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.72e-01 86.2% 93.3%
5mnjH00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 34.0 3.43e-01 100.0% 67.2%
2zuoA08 2.30.30.620 Mainly Beta › Roll › SH3 type barrels. › 0.50 40.0 4.17e-01 96.9% 96.6%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.50 34.0 3.64e-01 98.5% 94.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4853186 2002.1.1.128 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase 0.58 40.0 2.60e-01 72.3% 23.4%
136413 375.1.1.2 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin 0.56 42.0 4.38e-01 100.0% 86.7%
3958256 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 30.0 3.05e-01 83.1% 50.8%
5025801 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.55 41.0 3.13e-01 86.2% 90.3%
3945811 70.4.1.7 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › XM1_gp53_minor_capsid 0.50 36.0 3.78e-01 84.6% 85.0%