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YP_009798573.1
Arc-VirNC_047928__YP_009798573.1__HOS82-gp10__00010
Identity
- Accession:
- NC_047928 ↗
- Protein ID:
- YP_009798573.1 ↗
- Kingdom:
- archaea
Quality
86.6
mean pLDDT
Taxonomy
Trapavirae›
Saleviricota›
Huolimaviricetes›
Haloruvirales›
Pleolipoviridae›
Betapleolipovirus›
Haloarcula_hispanica_pleomorphic_virus_3
TaxID: 1879051
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-57
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26414.1 best | DUF8109 | 71.0 | 1.80e-19 | 100.0% | 40.9% |
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tp6A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.76 | 68.0 | 5.16e-01 | 100.0% | 45.2% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 66.0 | 5.06e-01 | 100.0% | 85.0% |
| 3hk4A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 60.0 | 4.68e-01 | 90.7% | 48.3% |
| 2l4vA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 64.0 | 4.80e-01 | 100.0% | 42.2% |
| 3soyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 63.0 | 4.66e-01 | 100.0% | 44.4% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 60.0 | 5.39e-01 | 96.3% | 68.4% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 60.0 | 4.58e-01 | 100.0% | 52.5% |
| 3g8zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 61.0 | 4.68e-01 | 98.1% | 43.0% |
| 1wnhA02 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 60.0 | 4.73e-01 | 100.0% | 50.0% |
| 3fcxB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.68 | 57.0 | 3.66e-01 | 96.3% | 29.1% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 57.0 | 4.36e-01 | 98.1% | 45.5% |
| 1pv1A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 56.0 | 3.55e-01 | 96.3% | 31.0% |
| 6qm7A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.67 | 54.0 | 3.59e-01 | 94.4% | 63.9% |
| 1sil000 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.66 | 57.0 | 3.45e-01 | 100.0% | 17.3% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.66 | 57.0 | 3.62e-01 | 100.0% | 19.0% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 58.0 | 3.48e-01 | 100.0% | 16.2% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 57.0 | 4.59e-01 | 100.0% | 88.2% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 57.0 | 5.09e-01 | 100.0% | 71.1% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 50.0 | 3.17e-01 | 100.0% | 14.8% |
| 3b7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 51.0 | 4.15e-01 | 96.3% | 46.7% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 51.0 | 3.93e-01 | 98.1% | 37.8% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 51.0 | 3.78e-01 | 100.0% | 38.9% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.63 | 52.0 | 3.28e-01 | 100.0% | 17.9% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.62 | 46.0 | 3.49e-01 | 79.6% | 35.4% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 50.0 | 3.02e-01 | 98.1% | 20.3% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.62 | 53.0 | 3.33e-01 | 100.0% | 17.4% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 53.0 | 4.09e-01 | 100.0% | 43.9% |
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.62 | 52.0 | 4.02e-01 | 100.0% | 61.2% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 50.0 | 3.68e-01 | 100.0% | 31.5% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.62 | 48.0 | 4.73e-01 | 94.4% | 80.0% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 49.0 | 3.91e-01 | 98.1% | 50.4% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 48.0 | 3.03e-01 | 94.4% | 16.0% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 50.0 | 4.18e-01 | 100.0% | 55.0% |
| 4xmeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 52.0 | 3.65e-01 | 98.1% | 28.8% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 50.0 | 3.74e-01 | 94.4% | 37.5% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.61 | 49.0 | 4.34e-01 | 98.1% | 73.6% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.61 | 53.0 | 3.70e-01 | 98.1% | 54.4% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.60 | 50.0 | 3.86e-01 | 100.0% | 100.0% |
| 6qm7J00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.59 | 48.0 | 3.32e-01 | 94.4% | 71.1% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.59 | 50.0 | 4.31e-01 | 96.3% | 74.7% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 48.0 | 3.97e-01 | 100.0% | 84.8% |
| 1tu5A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 47.0 | 3.96e-01 | 100.0% | 65.7% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 45.0 | 3.40e-01 | 88.9% | 40.1% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.58 | 47.0 | 3.27e-01 | 100.0% | 32.0% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 47.0 | 3.05e-01 | 94.4% | 35.7% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 44.0 | 3.30e-01 | 94.4% | 35.5% |
| 1v5mA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 45.0 | 3.50e-01 | 96.3% | 83.8% |
| 3bcyA00 | 3.40.1000.40 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 | 0.55 | 44.0 | 3.42e-01 | 100.0% | 41.1% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 45.0 | 3.67e-01 | 90.7% | 75.7% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 46.0 | 3.33e-01 | 98.1% | 64.0% |
| 1luiA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 43.0 | 3.51e-01 | 90.7% | 65.7% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.54 | 44.0 | 3.97e-01 | 100.0% | 81.7% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.27e-01 | 98.1% | 36.7% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.53 | 43.0 | 4.24e-01 | 100.0% | 85.7% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 42.0 | 3.23e-01 | 96.3% | 68.8% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.53 | 42.0 | 3.86e-01 | 90.7% | 82.4% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.52 | 41.0 | 3.50e-01 | 94.4% | 54.5% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.50 | 38.0 | 4.01e-01 | 85.2% | 97.9% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961805 | 295.1.1.55 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF26414 | 0.96 | 91.0 | 7.78e-01 | 100.0% | 67.5% |
| 5040972 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.77 | 69.0 | 6.17e-01 | 100.0% | 78.7% |
| 3808162 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.76 | 66.0 | 5.61e-01 | 98.1% | 66.7% |
| 4977517 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.76 | 66.0 | 5.96e-01 | 100.0% | 70.7% |
| 3269932 | 5.1.5.27 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › APEH_N | 0.76 | 59.0 | 3.41e-01 | 100.0% | 9.8% |
| 3734807 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.75 | 66.0 | 4.58e-01 | 98.1% | 61.8% |
| 3808505 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.75 | 62.0 | 5.40e-01 | 94.4% | 70.6% |
| 3346061 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.73 | 65.0 | 3.98e-01 | 100.0% | 17.3% |
| 3445964 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.72 | 64.0 | 4.07e-01 | 100.0% | 21.9% |
| 5034706 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.72 | 62.0 | 5.63e-01 | 100.0% | 76.0% |
| 5059920 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.71 | 60.0 | 5.15e-01 | 100.0% | 57.8% |
| 5052460 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 61.0 | 3.70e-01 | 100.0% | 15.6% |
| 4863136 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.70 | 61.0 | 4.73e-01 | 100.0% | 46.0% |
| 5016360 | 5.1.5.231 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › SBBP | 0.70 | 61.0 | 3.66e-01 | 100.0% | 15.1% |
| 3650660 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.70 | 57.0 | 4.28e-01 | 90.7% | 41.0% |
| 3924310 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 57.0 | 3.43e-01 | 100.0% | 13.2% |
| 5045339 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 62.0 | 3.76e-01 | 100.0% | 17.6% |
| 3257390 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 61.0 | 3.78e-01 | 100.0% | 17.7% |
| 3257215 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 62.0 | 3.65e-01 | 100.0% | 13.7% |
| 5078978 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.68 | 59.0 | 3.80e-01 | 100.0% | 20.4% |
| 5078225 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.68 | 59.0 | 5.83e-01 | 100.0% | 96.6% |
| 3807566 | 331.3.1.28 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 | 0.67 | 56.0 | 4.09e-01 | 96.3% | 39.4% |
| 3505182 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 51.0 | 4.57e-01 | 94.4% | 58.7% |
| 1146735 | 243.1.1.29 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4783 | 0.66 | 57.0 | 4.59e-01 | 100.0% | 88.2% |
| 3254995 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 55.0 | 3.27e-01 | 100.0% | 12.2% |
| 3584129 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.65 | 56.0 | 3.21e-01 | 100.0% | 9.7% |
| 3865506 | 4210.1.1.3 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › PF26166 | 0.65 | 57.0 | 4.55e-01 | 100.0% | 52.7% |
| 2321284 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 53.0 | 4.32e-01 | 98.1% | 58.8% |
| 3968646 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.65 | 52.0 | 3.99e-01 | 90.7% | 80.8% |
| 3735222 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 54.0 | 3.25e-01 | 100.0% | 12.3% |
| 3928054 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 55.0 | 3.56e-01 | 100.0% | 20.4% |
| 3187942 | 5.1.4.655 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9 | 0.64 | 55.0 | 3.07e-01 | 100.0% | 8.6% |
| 3697470 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 53.0 | 3.20e-01 | 100.0% | 12.3% |
| 3494118 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 55.0 | 4.01e-01 | 100.0% | 66.5% |
| 4944242 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.64 | 56.0 | 3.27e-01 | 100.0% | 12.3% |
| 5069442 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.64 | 52.0 | 3.35e-01 | 98.1% | 21.7% |
| 3193923 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 56.0 | 3.31e-01 | 100.0% | 12.7% |
| 3422280 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.64 | 54.0 | 4.33e-01 | 100.0% | 47.7% |
| 3249653 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.63 | 54.0 | 3.31e-01 | 96.3% | 27.6% |
| 3663999 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.63 | 54.0 | 3.35e-01 | 100.0% | 19.1% |
| 3258651 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 52.0 | 3.13e-01 | 100.0% | 12.7% |
| 3691625 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.63 | 54.0 | 3.21e-01 | 100.0% | 12.5% |
| 3206580 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.62 | 53.0 | 3.94e-01 | 100.0% | 69.3% |
| 4648747 | 243.3.1.8 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3889 | 0.62 | 48.0 | 4.36e-01 | 85.2% | 77.3% |
| 4029107 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 54.0 | 3.44e-01 | 100.0% | 20.0% |
| 5047887 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.62 | 49.0 | 3.36e-01 | 92.6% | 22.9% |
| 4487396 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 52.0 | 3.11e-01 | 100.0% | 12.5% |
| 3744407 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.61 | 52.0 | 3.12e-01 | 100.0% | 16.3% |
| 3265915 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.60 | 48.0 | 2.98e-01 | 88.9% | 95.2% |
| 3303238 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.60 | 49.0 | 3.97e-01 | 98.1% | 46.7% |
| 4426077 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.59 | 50.0 | 3.65e-01 | 96.3% | 38.1% |
| 3260045 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 50.0 | 4.57e-01 | 98.1% | 84.0% |
| 3622366 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 48.0 | 4.92e-01 | 94.4% | 100.0% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.59 | 47.0 | 3.92e-01 | 98.1% | 47.3% |
| 3601320 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 46.0 | 3.86e-01 | 94.4% | 50.0% |
| 3695698 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.57 | 47.0 | 3.62e-01 | 100.0% | 49.3% |
| 4009799 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.57 | 45.0 | 3.76e-01 | 92.6% | 48.6% |
| 3271023 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.56 | 46.0 | 3.38e-01 | 98.1% | 57.0% |
| 1122053 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.56 | 48.0 | 3.13e-01 | 100.0% | 82.3% |
| 3933484 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.56 | 44.0 | 3.30e-01 | 94.4% | 33.3% |
| 3488509 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.56 | 46.0 | 3.32e-01 | 98.1% | 59.4% |
| 3512529 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.56 | 45.0 | 3.39e-01 | 98.1% | 67.5% |
| 3937237 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 44.0 | 3.25e-01 | 94.4% | 64.8% |
| 3794870 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.54 | 44.0 | 3.32e-01 | 98.1% | 68.8% |
| 3230598 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 45.0 | 3.37e-01 | 98.1% | 71.3% |
| 2526491 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.54 | 45.0 | 3.36e-01 | 98.1% | 59.6% |
| 3246034 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.54 | 44.0 | 3.35e-01 | 98.1% | 63.3% |
| 3432801 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.53 | 44.0 | 3.15e-01 | 98.1% | 59.5% |
| 3467036 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.53 | 45.0 | 3.55e-01 | 98.1% | 75.8% |
| 3449001 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 42.0 | 2.72e-01 | 100.0% | 27.6% |
| 3397367 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.53 | 45.0 | 3.27e-01 | 98.1% | 57.0% |
| 3801224 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 41.0 | 3.27e-01 | 90.7% | 40.3% |
| 3739321 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.53 | 42.0 | 3.07e-01 | 94.4% | 58.7% |
| 3599321 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 42.0 | 3.05e-01 | 98.1% | 50.8% |
| 3464768 | 2004.1.1.481 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 | 0.52 | 41.0 | 3.07e-01 | 96.3% | 66.3% |
| 3897847 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.52 | 41.0 | 3.09e-01 | 98.1% | 71.0% |
| 4160858 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.51 | 40.0 | 3.11e-01 | 96.3% | 67.1% |
D2
high
residues 65-120
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.75 | 55.0 | 4.82e-01 | 78.6% | 54.2% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 47.0 | 3.99e-01 | 71.4% | 39.8% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 58.0 | 4.14e-01 | 91.1% | 32.3% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 51.0 | 4.56e-01 | 83.9% | 54.2% |
| 4ixjA01 | 3.30.1300.80 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.68 | 50.0 | 4.56e-01 | 80.4% | 66.2% |
| 3npiB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 56.0 | 3.86e-01 | 100.0% | 70.0% |
| 4rz7A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 50.0 | 3.93e-01 | 87.5% | 73.6% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.63 | 44.0 | 4.28e-01 | 78.6% | 67.7% |
| 2oq1A02 | 1.10.930.10 | Mainly Alpha › Orthogonal Bundle › Syk Kinase; Chain A, domain 2 › Syk Kinase; Chain A, domain 2 | 0.63 | 43.0 | 4.61e-01 | 78.6% | 91.1% |
| 1rajA01 | 4.10.880.10 | Few Secondary Structures › Irregular › Poliovirus 3D polymerase; domain 1 (Nucleotidyltransferase) › Poliovirus 3D polymerase Domain 1 (Nucleotidyltransferase) | 0.62 | 36.0 | 3.89e-01 | 71.4% | 70.5% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 4.88e-01 | 85.7% | 98.2% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.61 | 42.0 | 3.85e-01 | 78.6% | 53.2% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.61 | 46.0 | 3.44e-01 | 78.6% | 66.1% |
| 2n00A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 41.0 | 3.59e-01 | 73.2% | 73.7% |
| 6a3kA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.57 | 48.0 | 3.77e-01 | 100.0% | 82.2% |
| 4xcgA02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.56 | 43.0 | 3.50e-01 | 85.7% | 88.5% |
| 2kz6A01 | 6.10.140.1310 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 42.0 | 3.74e-01 | 91.1% | 61.7% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 44.0 | 3.26e-01 | 98.2% | 94.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3805996 | 192.10.1.7 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › HisKA | 0.85 | 44.0 | 3.92e-01 | 100.0% | 38.7% |
| 4003051 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.74 | 54.0 | 5.18e-01 | 78.6% | 72.3% |
| 3487862 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.70 | 48.0 | 3.10e-01 | 71.4% | 16.7% |
| 3889851 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.68 | 42.0 | 4.61e-01 | 75.0% | 77.8% |
| 3389928 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.65 | 48.0 | 3.24e-01 | 85.7% | 23.9% |
| 3176953 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.64 | 46.0 | 4.35e-01 | 85.7% | 62.9% |
| 3684868 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.63 | 55.0 | 4.13e-01 | 98.2% | 70.7% |
| 3357142 | 610.3.1.0 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain | 0.62 | 51.0 | 4.95e-01 | 94.6% | 90.6% |
| 3863510 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.62 | 45.0 | 4.15e-01 | 83.9% | 60.0% |
| 3278450 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.61 | 46.0 | 4.05e-01 | 80.4% | 56.2% |
| 4018084 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 48.0 | 4.47e-01 | 98.2% | 68.6% |
| 4371514 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.60 | 46.0 | 4.06e-01 | 82.1% | 98.8% |
| 3258925 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.59 | 45.0 | 4.16e-01 | 80.4% | 65.7% |
| 3592213 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.59 | 43.0 | 4.05e-01 | 82.1% | 64.3% |
| 3279122 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.56 | 42.0 | 3.49e-01 | 85.7% | 71.8% |
| 4108616 | 4336.2.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 | 0.53 | 37.0 | 3.36e-01 | 75.0% | 49.4% |