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NC_047937.1__YP_009799181.1__HOS91_gp02__00002
Bact-VirNC_047937.1__YP_009799181.1__HOS91_gp02__00002
Identity
- Accession:
- NC_047937 ↗
- Kingdom:
- phage
Quality
85.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autotranscriptaviridae›
Helsettvirus›
Yersinia_phage_fPS-54-ocr
TaxID: 2052753
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-143
Domain cluster:
rep: MN013085.1__QEG13341.1__NAHI_5__00005__D3-143
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27024.1 best | Phage_T7_kinase | 198.2 | 3.30e-58 | 100.0% | 35.7% |
D2
high
residues 152-229
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27024.1 best | Phage_T7_kinase | 90.5 | 1.70e-25 | 100.0% | 21.1% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fppA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.67 | 49.0 | 4.03e-01 | 94.9% | 43.1% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.62 | 43.0 | 3.57e-01 | 87.2% | 41.8% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 44.0 | 4.03e-01 | 100.0% | 57.3% |
| 1mdyA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.53 | 33.0 | 3.54e-01 | 73.1% | 72.1% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.53 | 32.0 | 3.24e-01 | 80.8% | 61.8% |
| 4gh9A01 | 1.10.8.950 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain | 0.52 | 37.0 | 3.84e-01 | 74.4% | 92.9% |
| 2qe9B01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.52 | 35.0 | 2.81e-01 | 78.2% | 34.8% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 45.0 | 3.60e-01 | 100.0% | 86.2% |
| 1vjxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 39.0 | 3.16e-01 | 83.3% | 70.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3593023 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 48.0 | 3.19e-01 | 70.5% | 66.0% |
| 3591562 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 44.0 | 3.02e-01 | 93.6% | 20.7% |
| 5041156 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.62 | 54.0 | 4.23e-01 | 96.2% | 66.1% |
| 2168246 | 1176.1.1.1 ↗ | alpha arrays › Nitrogenase vanadium-iron protein delta chain › Nitrogenase vanadium-iron protein delta chain › Nitrogenase vanadium-iron protein delta chain › AnfG_VnfG | 0.61 | 44.0 | 3.97e-01 | 76.9% | 70.8% |
| 3937794 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 43.0 | 2.88e-01 | 75.6% | 98.2% |
| 4022266 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.60 | 46.0 | 3.50e-01 | 84.6% | 64.2% |
| 3927673 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 43.0 | 2.78e-01 | 75.6% | 87.6% |
| 3617778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 41.0 | 3.49e-01 | 73.1% | 84.0% |
| 3240369 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.57 | 41.0 | 2.78e-01 | 75.6% | 82.8% |
| 4669204 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 40.0 | 2.57e-01 | 74.4% | 35.3% |
| 3168396 | 192.15.1.170 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › SWIRM-assoc_1 | 0.57 | 32.0 | 2.73e-01 | 75.6% | 34.4% |
| 3698820 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 42.0 | 2.81e-01 | 89.7% | 19.7% |
| 3992612 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.54 | 33.0 | 3.18e-01 | 87.2% | 53.3% |
| 4499267 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 39.0 | 3.26e-01 | 82.1% | 92.0% |
| 3486978 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 36.0 | 2.57e-01 | 73.1% | 35.3% |
| 4176828 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.51 | 30.0 | 3.19e-01 | 85.9% | 64.3% |
| 4613954 | 4271.1.1.0 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like | 0.50 | 37.0 | 2.79e-01 | 78.2% | 55.7% |