Back to structures

NC_047945.1__YP_009799574.1__HOS99_gp070__00070

Bact-Vir

NC_047945.1__YP_009799574.1__HOS99_gp070__00070

Identity

Accession:
NC_047945 ↗
Kingdom:
phage

Quality

65.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-123_214-266
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gpcA00 3.90.198.10 Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein 0.64 52.0 4.60e-01 85.0% 97.7%
3vxvA00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.50 17.0 2.48e-01 73.2% 61.5%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.50 18.0 2.63e-01 71.9% 70.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942656 2.1.1.45 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 0.72 58.0 5.20e-01 83.7% 99.5%
3218156 389.1.1.145 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF29138 0.60 19.0 3.37e-01 73.9% 91.1%
4443054 3115.1.1.9 a+b two layers › GP2-like › RplX-like › RplX-like › YjeJ 0.51 26.0 2.94e-01 87.6% 59.2%